RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 NHLRC3Q5JS37 347 aa15.17■□□□□ 0.02
PHTF1-205ENST00000393357 ZNF761Q86XN6 746 aaPredicted RBP15.17■□□□□ 0.02
PHTF1-205ENST00000393357 PDZD9Q8IXQ8 264 aa15.17■□□□□ 0.02
PHTF1-205ENST00000393357 SUN3Q8TAQ9 357 aa15.17■□□□□ 0.02
PHTF1-205ENST00000393357 ZNF689Q96CS4 500 aaPredicted RBP15.17■□□□□ 0.02
PHTF1-205ENST00000393357 REG4Q9BYZ8 158 aa15.17■□□□□ 0.02
PHTF1-205ENST00000393357 ASB6Q9NWX5 421 aa15.17■□□□□ 0.02
PHTF1-205ENST00000393357 MOKQ9UQ07 419 aa15.17■□□□□ 0.02
PHTF1-205ENST00000393357 MFSD2BA6NFX1 497 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 OR52A4PA6NMU1 304 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 C4orf47A7E2U8 309 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 MCRIP1C9JLW8 97 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 PRKNO60260 465 aaPredicted RBP15.16■□□□□ 0.02
PHTF1-205ENST00000393357 PCCBP05166 539 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 S100A11P31949 105 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 EFNB1P98172 346 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 NIPAL3Q6P499 406 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 OR10K1Q8NGX5 313 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 SYNPRQ8TBG9 265 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 DUSP19Q8WTR2 217 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 VOPP1Q96AW1 172 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 RGMAQ96B86 450 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 PTCHD1Q96NR3 888 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 LYSMD1Q96S90 227 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 NPAS1Q99742 590 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 SLC38A1Q9H2H9 487 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 SLC39A1Q9NY26 324 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 ASB4Q9Y574 426 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 A0A0G2JK05 382 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 GPR31O00270 319 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 GRM6O15303 877 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 GREM1O60565 184 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 STX11O75558 287 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 C6P13671 934 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 MESP2Q0VG99 397 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 GPNMBQ14956 572 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 NNATQ16517 81 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 DEFB115Q30KQ5 88 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 IGSF11Q5DX21 431 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 GSG1LQ6UXU4 331 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 RNF44Q7L0R7 432 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 UBE2Q1Q7Z7E8 422 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 CBLN2Q8IUK8 224 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 ZNF547Q8IVP9 402 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 TRAM1L1Q8N609 369 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 OR52N1Q8NH53 320 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 OR4C6Q8NH72 309 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 HAVCR2Q8TDQ0 301 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 ACOT11Q8WXI4 607 aaPredicted RBP15.16■□□□□ 0.02
PHTF1-205ENST00000393357 TCEAL4Q96EI5 215 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 MS4A8Q9BY19 250 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 KCNK6Q9Y257 313 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 INSL5Q9Y5Q6 135 aa15.16■□□□□ 0.02
PHTF1-205ENST00000393357 A0A1W2PR48 441 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 PEX12O00623 359 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 CASC3O15234 703 aaKnown RBP15.15■□□□□ 0.02
PHTF1-205ENST00000393357 RPL4P36578 427 aaKnown RBP15.15■□□□□ 0.02
PHTF1-205ENST00000393357 WASP42768 502 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 ELAVL2Q12926 359 aaKnown RBP15.15■□□□□ 0.02
PHTF1-205ENST00000393357 PRRT3Q5FWE3 981 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 SLC8B1Q6J4K2 584 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 ZNF783Q6ZMS7 281 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 WDR88Q6ZMY6 472 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 LINC00518Q8N0U6 118 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 CHST6Q9GZX3 395 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 MFFQ9GZY8 342 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 SIDT1Q9NXL6 827 aaKnown RBP15.15■□□□□ 0.02
PHTF1-205ENST00000393357 ACAD8Q9UKU7 415 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 WDR45Q9Y484 360 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 H2BFSP57053 126 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 PCBP4P57723 403 aaKnown RBP15.15■□□□□ 0.02
PHTF1-205ENST00000393357 RGS7BPQ6MZT1 257 aaPredicted RBP15.15■□□□□ 0.02
PHTF1-205ENST00000393357 SEZ6L2Q6UXD5 910 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 PARS2Q7L3T8 475 aaKnown RBP15.15■□□□□ 0.02
PHTF1-205ENST00000393357 TMEM185AQ8NFB2 350 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 DIO2Q92813 273 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 FGF11Q92914 225 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 SLC38A3Q99624 504 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 SLC46A2Q9BY10 475 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 SHARPINQ9H0F6 387 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 ADAM18Q9Y3Q7 739 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 FAM86C2PA6NEL3 165 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 C4orf51C9J302 202 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 PITPNAQ00169 270 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 SLC9A5Q14940 896 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 FAM26DQ5JW98 314 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 OR4C11Q6IEV9 310 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 IKBIPQ70UQ0 350 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 TTLQ8NG68 377 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 TNFRSF13CQ96RJ3 184 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 TIMP4Q99727 224 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 USB1Q9BQ65 265 aaKnown RBP15.15■□□□□ 0.02
PHTF1-205ENST00000393357 PTDSS2Q9BVG9 487 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 ULBP3Q9BZM4 244 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 ZDHHC5Q9C0B5 715 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 PIPOXQ9P0Z9 390 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 Q9Y3F1 56 aa15.15■□□□□ 0.02
PHTF1-205ENST00000393357 UNC119BA6NIH7 251 aa15.14■□□□□ 0.01
PHTF1-205ENST00000393357 SEC61A1P61619 476 aaKnown RBP15.14■□□□□ 0.01
PHTF1-205ENST00000393357 FOXK2Q01167 660 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms