RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 ZNF880Q6PDB4 577 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 IYDQ6PHW0 289 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 FAM159AQ6UWV7 190 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 C1orf186Q6ZWK4 172 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 C16orf62Q7Z3J2 963 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 ADAMTSL2Q86TH1 951 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 ZNF547Q8IVP9 402 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 EFCAB13Q8IY85 973 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 UBALD2Q8IYN6 164 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 C15orf54Q8N8G6 183 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 NKAPP1Q8N9T2 125 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 TMEM185AQ8NFB2 350 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 OR6C4Q8NGE1 309 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 OR10G9Q8NGN4 311 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 EXOC6Q8TAG9 804 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 DTX3LQ8TDB6 740 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 BRSK1Q8TDC3 778 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 MCOLN3Q8TDD5 553 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 RNASE8Q8TDE3 154 aaKnown RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 GIMAP1Q8WWP7 306 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 RAPGEF5Q92565 580 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 FCGR1BQ92637 280 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 MRPS31Q92665 395 aaKnown RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 NCLNQ969V3 563 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 SLC25A36Q96CQ1 311 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 DTD2Q96FN9 168 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 FAHD2AQ96GK7 314 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 OR10C1Q96KK4 312 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 TAAR1Q96RJ0 339 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 CYP2S1Q96SQ9 504 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 CDX2Q99626 313 aaPredicted RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 DUSP16Q9BY84 665 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 TMEM231Q9H6L2 316 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 SMYD3Q9H7B4 428 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 DMAP1Q9NPF5 467 aaPredicted RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 PRMT8Q9NR22 394 aaPredicted RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 NUDT15Q9NV35 164 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 ZNF226Q9NYT6 803 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 SLC25A37Q9NYZ2 338 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 KCNN3Q9UGI6 736 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 WARS2Q9UGM6 360 aaKnown RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 PCYOX1Q9UHG3 505 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 MRPS33Q9Y291 106 aaKnown RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 TP53TG5Q9Y2B4 290 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 OARD1Q9Y530 152 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 YTHDF2Q9Y5A9 579 aaKnown RBP0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 AP4B1Q9Y6B7 739 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 V9GY05 133 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 SPACA6W5XKT8 324 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 METP08581 1390 aa0.67□□□□□ -2.3
SNORD28B-201ENST00000390993 RPGRIP1LQ68CZ1 1315 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 A0A0G2JN53 185 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 A0A1W2PP18 115 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 FAM170AA1A519 330 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 SYCE3A1L190 88 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 FAM74A7A6NL05 159 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 PP2D1A8MPX8 630 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 TNFSF13O75888 250 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 TGDSO95455 350 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 GNA14O95837 355 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 ABHD2P08910 425 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 POLR2MP0CAP2 368 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 CHTF8P0CG12 524 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 CCDC192P0DO97 292 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 ATP6V1B2P21281 511 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 CMA1P23946 247 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 PSMA2P25787 234 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 FMO3P31513 532 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 KIF5BP33176 963 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 ARRB1P49407 418 aaPredicted RBP0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 LIM2P55344 173 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 MEF2BQ02080 365 aaPredicted RBP0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 KLHL30Q0D2K2 578 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 EXOSC2Q13868 293 aaKnown RBP0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 LAGE3Q14657 143 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 ATXN7L3Q14CW9 347 aaPredicted RBP0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 FAM74A3Q4VXF1 159 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 TMEM255AQ5JRV8 349 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 COA6Q5JTJ3 125 aaKnown RBP0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 C1orf100Q5SVJ3 147 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 DNLZQ5SXM8 178 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 FAM120AOSQ5T036 256 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 NCR3LG1Q68D85 454 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 NEK5Q6P3R8 708 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 UNC5DQ6UXZ4 953 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 ZNF620Q6ZNG0 422 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 SHISA6Q6ZSJ9 500 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 ACOT7LQ6ZUV0 252 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 LANCL3Q6ZV70 420 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 H2AFVQ71UI9 128 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 ANKRD37Q7Z713 158 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 TMEM17Q86X19 198 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 IQCA1Q86XH1 822 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 C12orf56Q8IXR9 622 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 FTMTQ8N4E7 242 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 CCNYQ8ND76 341 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 OR10G3Q8NGC4 313 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 CNIH3Q8TBE1 160 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 ACER1Q8TDN7 264 aa0.66□□□□□ -2.3
SNORD28B-201ENST00000390993 ST8SIA1Q92185 356 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms