RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CFAP221Q4G0U5 840 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 NBPF5PQ86XG9 351 aaPredicted RBP4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 OR5D13Q8NGL4 314 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 MRAPQ8TCY5 172 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 HTR3CQ8WXA8 447 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 SLC25A38Q96DW6 304 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 RAB34Q9BZG1 259 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 NMUR2Q9GZQ4 415 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 Q9H3A6 140 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 PTGES2Q9H7Z7 377 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 POPDC2Q9HBU9 364 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 SLC7A10Q9NS82 523 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 CLEC4EQ9ULY5 219 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 MEMO1Q9Y316 297 aa4.05□□□□□ -1.76
RNU6-40P-201ENST00000384254 PNPLA6Q8IY17 1366 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 IGHV7-81A0A0B4J1V7 117 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 A0A1B0GWB2 263 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 A0A1W2PQ72 361 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 TRDCB7Z8K6 153 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 GOLGA8SH3BPF8 625 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 CDX4O14627 284 aaPredicted RBP4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 PHOX2AO14813 284 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 RGS16O15492 202 aaPredicted RBP4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 MED7O43513 233 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 B4GALT2O60909 372 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 DIRAS1O95057 198 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 LGALS2P05162 132 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 OR8U8P0C7N1 319 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 POLR2EP19388 210 aaKnown RBP4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 CCT3P49368 545 aaKnown RBP4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 CASP4P49662 377 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 HNRNPA3P51991 378 aaKnown RBP4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 HSPA2P54652 639 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 CCDC173Q0VFZ6 552 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 ELAVL3Q14576 367 aaKnown RBP4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 ARL6IP1Q15041 203 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 ZNF239Q16600 458 aaKnown RBP4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 LRRC36Q1X8D7 754 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 Q6ZR54 194 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 ZNF677Q86XU0 584 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 LRRC75A-AS1Q8N1F1 130 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 OR13C2Q8NGS9 318 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 NEIL2Q969S2 332 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 HAVCR1Q96D42 359 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 SMIM14Q96QK8 99 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 CLCC1Q96S66 551 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 COPS8Q99627 209 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 SGK2Q9HBY8 427 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 B3GNT2Q9NY97 397 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 DCDC2Q9UHG0 476 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 ANGPTL2Q9UKU9 493 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 PRPF19Q9UMS4 504 aaKnown RBP4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 PIGLQ9Y2B2 252 aa4.04□□□□□ -1.76
RNU6-40P-201ENST00000384254 RPAP1Q9BWH6 1393 aaPredicted RBP4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 FAM168BA1KXE4 195 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 HELTA6NFD8 242 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 ZNF705EA8MWA4 302 aaPredicted RBP4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 PFKFB2O60825 505 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 IGLL1P15814 213 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 PSMB1P20618 241 aaKnown RBP4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 PCMT1P22061 227 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 EPS15P42566 896 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 MAGEA8P43361 318 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 PKNOX1P55347 436 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 RIPK4P57078 832 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 TNFRSF17Q02223 184 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 C1orf61Q13536 156 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 DDX39BQ13838 428 aaKnown RBP4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 IMMTQ16891 758 aaKnown RBP4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 RSBN1Q5VWQ0 802 aaPredicted RBP4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 SPINK14Q6IE38 97 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 OR4F3Q6IEY1 312 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 WDR74Q6RFH5 385 aaPredicted RBP4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 CXCL17Q6UXB2 119 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 TRPM8Q7Z2W7 1104 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 PPP1R27Q86WC6 154 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 TGIF2LXQ8IUE1 241 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 SVOPLQ8N434 492 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 MFSD9Q8NBP5 474 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 MAPKAP1Q9BPZ7 522 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 SRXN1Q9BYN0 137 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 MAGT1Q9H0U3 335 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 NHEJ1Q9H9Q4 299 aaPredicted RBP4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 POLE4Q9NR33 117 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 VNN3Q9NY84 501 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 BFARQ9NZS9 450 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 ADAM28Q9UKQ2 775 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 TMCO1Q9UM00 188 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 CA5BQ9Y2D0 317 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 POLDIP2Q9Y2S7 368 aa4.03□□□□□ -1.76
RNU6-40P-201ENST00000384254 KLF18A0A0U1RQI7 1052 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 FAM240BA0A1B0GVZ2 78 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 VSTM2BA6NLU5 285 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 ATP5LO75964 103 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 NCF2P19878 526 aaPredicted RBP4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 COX5AP20674 150 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 GNA11P29992 359 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 MAP3K8P41279 467 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 ASPHQ12797 758 aa4.02□□□□□ -1.77
RNU6-40P-201ENST00000384254 ISXQ2M1V0 245 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms