RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 APOBEC4Q8WW27 367 aaKnown RBP12.84□□□□□ -0.35
SDC1-202ENST00000381150 OSTF1Q92882 214 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 NUS1Q96E22 293 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 ZDHHC5Q9C0B5 715 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 EVA1AQ9H8M9 152 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 TAS2R10Q9NYW0 307 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 A0A1W2PS29 197 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 SURF4O15260 269 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 PI15O43692 258 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 NARSO43776 548 aaKnown RBP12.84□□□□□ -0.35
SDC1-202ENST00000381150 UBL3O95164 117 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 ADH1CP00326 375 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 ADRB3P13945 408 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 ACHEP22303 614 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 TRAM2Q15035 370 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 SLC22A10Q63ZE4 541 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 FAM83HQ6ZRV2 1179 aaPredicted RBP12.84□□□□□ -0.35
SDC1-202ENST00000381150 SLC9B2Q86UD5 537 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 OR51Q1Q8NH59 317 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 HERVK_113Q902F9 699 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 OR14A2Q96R54 314 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 SLC38A3Q99624 504 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 UQCC2Q9BRT2 126 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 ASB6Q9NWX5 421 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 PTTG3PQ9NZH4 202 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 NDOR1Q9UHB4 597 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 CBLCQ9ULV8 474 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 PLCL2Q9UPR0 1127 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 AUP1Q9Y679 476 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 SDK1Q7Z5N4 2213 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 C2orf16Q68DN1 1984 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 UBE2QL1A1L167 161 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 ACOD1A6NK06 481 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 LINC01387J3KSC0 135 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 PTBP1P26599 531 aaKnown RBP eCLIP12.84□□□□□ -0.35
SDC1-202ENST00000381150 ADH7P40394 386 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 SORDQ00796 357 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 TGM3Q08188 693 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 ST3GAL3Q11203 375 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 TSPAN31Q12999 210 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 PDE7AQ13946 482 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 GNA13Q14344 377 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 TMEM52BQ4KMG9 183 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 PRAMEF14Q5SWL7 426 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 PRAMEF13Q5VWM6 474 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 GSG1LQ6UXU4 331 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 TMUB2Q71RG4 321 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 FCRLAQ7L513 359 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 OR52L1Q8NGH7 329 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 HGDQ93099 445 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 DPYSL5Q9BPU6 564 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 GPR174Q9BXC1 333 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 NEUROD4Q9HD90 331 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 HRASLSQ9HDD0 168 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 A4GALTQ9NPC4 353 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 KLHL28Q9NXS3 571 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 PRKAG2Q9UGJ0 569 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 KIF25Q9UIL4 384 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 GPR34Q9UPC5 381 aa12.84□□□□□ -0.35
SDC1-202ENST00000381150 COL4A3Q01955 1670 aa12.83□□□□□ -0.35
SDC1-202ENST00000381150 CDC42EP2O14613 210 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 POP7O75817 140 aaKnown RBP12.83□□□□□ -0.36
SDC1-202ENST00000381150 NDUFV2P19404 249 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 C4orf46Q504U0 113 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 RGS7BPQ6MZT1 257 aaPredicted RBP12.83□□□□□ -0.36
SDC1-202ENST00000381150 C12orf76Q8N812 135 aaPredicted RBP12.83□□□□□ -0.36
SDC1-202ENST00000381150 OR10K1Q8NGX5 313 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 OR2L2Q8NH16 312 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 OR5J2Q8NH18 312 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 PTP4A1Q93096 173 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 TM4SF18Q96CE8 201 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 SPATA5L1Q9BVQ7 753 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 REG4Q9BYZ8 158 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 OR52A5Q9H2C5 316 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 LDAHQ9H6V9 325 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 SYNPO2LQ9H987 977 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 SLC6A20Q9NP91 592 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 ACTR10Q9NZ32 417 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 EDARQ9UNE0 448 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 ERVK-19Q9WJR5 959 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 EDDM13A0A1B0GTR0 161 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 CDHR4A6H8M9 788 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 DISC1C4P0D8 188 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 MCRIP1C9JLW8 97 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 TMPRSS11DO60235 418 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 GKN3PP0CG01 181 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 GPR1P46091 355 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 SOX2P48431 317 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 CCR9P51686 369 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 PNLIPRP1P54315 467 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 GPR85P60893 370 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 RPE65Q16518 533 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 LINC00303Q3SY05 128 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 FAM78AQ5JUQ0 283 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 ENTPD8Q5MY95 495 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 AADACL4Q5VUY2 407 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 METTL11BQ5VVY1 283 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 CLRN3Q8NCR9 226 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 OR11G2Q8NGC1 345 aa12.83□□□□□ -0.36
SDC1-202ENST00000381150 TSNAXQ99598 290 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms