RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 ZNF169Q14929 603 aaPredicted RBP11.75□□□□□ -0.53
CBWD3-203ENST00000377344 PLPPR5Q32ZL2 321 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 PODNL1Q6PEZ8 512 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 TBPL2Q6SJ96 375 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 ZNF730Q6ZMV8 503 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 ASB18Q6ZVZ8 466 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 GRINAQ7Z429 371 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 HIPK1Q86Z02 1210 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 SVOPLQ8N434 492 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 FAM98AQ8NCA5 519 aaKnown RBP11.75□□□□□ -0.53
CBWD3-203ENST00000377344 OR4C15Q8NGM1 316 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 OR5M1Q8NGP8 315 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 MPP4Q96JB8 637 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 DHRS1Q96LJ7 313 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 BARD1Q99728 777 aaKnown RBP11.75□□□□□ -0.53
CBWD3-203ENST00000377344 TTTY12Q9BZ98 90 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 ANKRD19PQ9H560 264 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 ZNF71Q9NQZ8 489 aaPredicted RBP11.75□□□□□ -0.53
CBWD3-203ENST00000377344 OSGIN1Q9UJX0 560 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 PTPRQQ9UMZ3 2332 aa11.75□□□□□ -0.53
CBWD3-203ENST00000377344 PCNX3Q9H6A9 2034 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 A0A087WZY1 265 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 KPNA4O00629 521 aaPredicted RBP11.74□□□□□ -0.53
CBWD3-203ENST00000377344 OR10H3O60404 316 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 WISP1O95388 367 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 PNMTP11086 282 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 HTR3AP46098 478 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 POLR2HP52434 150 aaKnown RBP11.74□□□□□ -0.53
CBWD3-203ENST00000377344 HMGA2P52926 109 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 FOXK1P85037 733 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 SEC23BQ15437 767 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 SWT1Q5T5J6 900 aaKnown RBP11.74□□□□□ -0.53
CBWD3-203ENST00000377344 RAET1LQ5VY80 246 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 SHQ1Q6PI26 577 aaKnown RBP11.74□□□□□ -0.53
CBWD3-203ENST00000377344 TTC33Q6PID6 262 aaPredicted RBP11.74□□□□□ -0.53
CBWD3-203ENST00000377344 C19orf48Q6RUI8 117 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 WDR88Q6ZMY6 472 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 ATG4DQ86TL0 474 aaPredicted RBP11.74□□□□□ -0.53
CBWD3-203ENST00000377344 OR14L1PQ8NHC6 308 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 GIPC3Q8TF64 312 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 DTNBP1Q96EV8 351 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 NPAS1Q99742 590 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 PRSS27Q9BQR3 290 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 ADAM19Q9H013 955 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 PCDHGB6Q9Y5F9 930 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 A0A087WUJ7 227 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 A0A087WUU8 490 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 TMED7-TICAM2A0A0A6YYA0 188 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 SH3PXD2BA1X283 911 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 LYPD3O95274 346 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 SRD5A2P31213 254 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 LIMS1P48059 325 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 PTDSS1P48651 473 aaKnown RBP11.74□□□□□ -0.53
CBWD3-203ENST00000377344 PPIAP62937 165 aaKnown RBP11.74□□□□□ -0.53
CBWD3-203ENST00000377344 PMP22Q01453 160 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 MICAQ29983 383 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 LINC00303Q3SY05 128 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 ZBTB49Q6ZSB9 765 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 YRDCQ86U90 279 aaKnown RBP11.74□□□□□ -0.53
CBWD3-203ENST00000377344 EPHX4Q8IUS5 362 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 P3H2Q8IVL5 708 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 CBR4Q8N4T8 237 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 ATP6V1C2Q8NEY4 427 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 OR10G2Q8NGC3 310 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 OR4K5Q8NGD3 323 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 OR9Q2Q8NGE9 314 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 C9orf43Q8TAL5 461 aaPredicted RBP11.74□□□□□ -0.53
CBWD3-203ENST00000377344 TMEM239Q8WW34 195 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 ACOT11Q8WXI4 607 aaPredicted RBP11.74□□□□□ -0.53
CBWD3-203ENST00000377344 RELTQ969Z4 430 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 ZBTB8AQ96BR9 441 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 MRGPRX4Q96LA9 322 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 C9orf16Q9BUW7 83 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 ZNF703Q9H7S9 590 aaPredicted RBP11.74□□□□□ -0.53
CBWD3-203ENST00000377344 KIF17Q9P2E2 1029 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 TMED7Q9Y3B3 224 aa11.74□□□□□ -0.53
CBWD3-203ENST00000377344 ACOT7O00154 380 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 CASQ2O14958 399 aaPredicted RBP11.73□□□□□ -0.53
CBWD3-203ENST00000377344 APOBEC1P41238 236 aaKnown RBP11.73□□□□□ -0.53
CBWD3-203ENST00000377344 EIF1P41567 113 aaKnown RBP11.73□□□□□ -0.53
CBWD3-203ENST00000377344 MAGEA5P43359 124 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 LSM11P83369 360 aaKnown RBP eCLIP11.73□□□□□ -0.53
CBWD3-203ENST00000377344 GK3PQ14409 553 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 SLC22A16Q86VW1 577 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 GALNT4Q8N4A0 578 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 TMEM251Q8N6I4 163 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 RBMXL3Q8N7X1 1067 aaKnown RBP11.73□□□□□ -0.53
CBWD3-203ENST00000377344 ATG16L2Q8NAA4 619 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 ZFP62Q8NB50 900 aaPredicted RBP11.73□□□□□ -0.53
CBWD3-203ENST00000377344 FAM83FQ8NEG4 500 aaPredicted RBP11.73□□□□□ -0.53
CBWD3-203ENST00000377344 NRG4Q8WWG1 115 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 NRBF2Q96F24 287 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 HS6ST2Q96MM7 605 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 UBQLN3Q9H347 655 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 PRORYQ9H606 182 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 COQ10BQ9H8M1 238 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 PRDM4Q9UKN5 801 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 B3GNT3Q9Y2A9 372 aa11.73□□□□□ -0.53
CBWD3-203ENST00000377344 SOCS2O14508 198 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms