RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 ERVK-6Q9BXR3 956 aa4.02□□□□□ -1.77
PMS1-202ENST00000374826 ROPN1BQ9BZX4 212 aaPredicted RBP4.02□□□□□ -1.77
PMS1-202ENST00000374826 AICDAQ9GZX7 198 aa4.02□□□□□ -1.77
PMS1-202ENST00000374826 DRC3Q9H069 523 aa4.02□□□□□ -1.77
PMS1-202ENST00000374826 NOL11Q9H8H0 719 aaKnown RBP4.02□□□□□ -1.77
PMS1-202ENST00000374826 ROPN1Q9HAT0 212 aaPredicted RBP4.02□□□□□ -1.77
PMS1-202ENST00000374826 ANKHQ9HCJ1 492 aa4.02□□□□□ -1.77
PMS1-202ENST00000374826 SLC17A7Q9P2U7 560 aa4.02□□□□□ -1.77
PMS1-202ENST00000374826 DCDC2Q9UHG0 476 aa4.02□□□□□ -1.77
PMS1-202ENST00000374826 TMCO1Q9UM00 188 aa4.02□□□□□ -1.77
PMS1-202ENST00000374826 PADI2Q9Y2J8 665 aa4.02□□□□□ -1.77
PMS1-202ENST00000374826 RNF11Q9Y3C5 154 aa4.02□□□□□ -1.77
PMS1-202ENST00000374826 PTRH2Q9Y3E5 179 aaKnown RBP4.02□□□□□ -1.77
PMS1-202ENST00000374826 NAALAD2Q9Y3Q0 740 aa4.02□□□□□ -1.77
PMS1-202ENST00000374826 PRRC2CQ9Y520 2896 aaKnown RBP4.02□□□□□ -1.77
PMS1-202ENST00000374826 A0A1B0GVY2 172 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 CCDC189A1A4V9 331 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 ANKDD1BA6NHY2 528 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 MAGEB17A8MXT2 336 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 C21orf140B9A014 251 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 SAP18O00422 153 aaKnown RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 RTCAO00442 366 aaKnown RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 TXNDC9O14530 226 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 GALR3O60755 368 aaPredicted RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 DNAJB6O75190 326 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 JRKO75564 520 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 CDC123O75794 336 aaPredicted RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 NSA2O95478 260 aaKnown RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 CLDN9O95484 217 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 TBX6O95947 436 aaPredicted RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 LDLRP01130 860 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 SERPINA6P08185 405 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 RAB40ALP0C0E4 278 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 CPA3P15088 417 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 ALOX12P18054 663 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 CD53P19397 219 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 PTPN4P29074 926 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 XCR1P46094 333 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 EFNA3P52797 238 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 PLA2G16P53816 162 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 RELAQ04206 551 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 KLC1Q07866 573 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 FAM53BQ14153 422 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 FGFBP1Q14512 234 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 ZRSR2Q15696 482 aaKnown RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 PRICKLE4Q2TBC4 344 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 DEFB109BQ30KR1 87 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 CCDC153Q494R4 210 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 PAGE2BQ5JRK9 111 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 TCHHL1Q5QJ38 904 aaPredicted RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 ZNF678Q5SXM1 525 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 C6orf141Q5SZD1 244 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 GARNL3Q5VVW2 1013 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 TTC19Q6DKK2 380 aaPredicted RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 HIST2H2AA3Q6FI13 130 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 FAAH2Q6GMR7 532 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 MED27Q6P2C8 311 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 PRMT9Q6P2P2 845 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 PQLC2Q6ZP29 291 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 ZCCHC23Q6ZST2 131 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 GPRIN3Q6ZVF9 776 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 SYVN1Q86TM6 617 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 HAPLN4Q86UW8 402 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 SLC22A9Q8IVM8 553 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 C10orf107Q8IVU9 208 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 IQCKQ8N0W5 287 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 TRPV3Q8NET8 790 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 OR7G3Q8NG95 312 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 OR4F6Q8NGB9 312 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 UTP15Q8TED0 518 aaKnown RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 ZNF473Q8WTR7 871 aaKnown RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 MS4A6EQ96DS6 147 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 FBXO17Q96EF6 278 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 L3HYPDHQ96EM0 354 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 RNF125Q96EQ8 232 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 WDR34Q96EX3 536 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 F2RL3Q96RI0 385 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 KCNA7Q96RP8 456 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 C17orf62Q9BQA9 187 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 TMEM109Q9BVC6 243 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 CAPS2Q9BXY5 557 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 MS4A8Q9BY19 250 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 SHCBP1LQ9BZQ2 653 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 SLC25A18Q9H1K4 315 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 RHBGQ9H310 441 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 OR51B5Q9H339 312 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 EHD1Q9H4M9 534 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 PRORYQ9H606 182 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 NT5DC2Q9H857 520 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 COPS7BQ9H9Q2 264 aaPredicted RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 BRF2Q9HAW0 419 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 MID1IP1Q9NPA3 183 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 SLC6A13Q9NSD5 602 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 FARSBQ9NSD9 589 aaKnown RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 COPG2Q9UBF2 871 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 TRPC4Q9UBN4 977 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 ZNF282Q9UDV7 671 aaPredicted RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 GRID1Q9ULK0 1009 aa4.01□□□□□ -1.77
PMS1-202ENST00000374826 ZNF490Q9ULM2 529 aaPredicted RBP4.01□□□□□ -1.77
PMS1-202ENST00000374826 TCF19Q9Y242 345 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms