RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 DAPL1A0PJW8 107 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 TRAPPC13A5PLN9 417 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 KIAA0355O15063 1070 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 FLRT2O43155 660 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 SLC25A12O75746 678 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 KLHL18O94889 574 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 CD160O95971 181 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 F12P00748 615 aaPredicted RBP11.98□□□□□ -0.49
PRPF4-201ENST00000374198 RHOCP08134 193 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 UCHL1P09936 223 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 DDX6P26196 483 aaKnown RBP eCLIP11.98□□□□□ -0.49
PRPF4-201ENST00000374198 CSF2RBP32927 897 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 IFNGR2P38484 337 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 SPAM1P38567 509 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 LUMP51884 338 aaPredicted RBP11.98□□□□□ -0.49
PRPF4-201ENST00000374198 UBE2MP61081 183 aaKnown RBP11.98□□□□□ -0.49
PRPF4-201ENST00000374198 ARF5P84085 180 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 B4GALNT1Q00973 533 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 EIF2S3LQ2VIR3 472 aaKnown RBP11.98□□□□□ -0.49
PRPF4-201ENST00000374198 ZNF425Q6IV72 752 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 C3orf33Q6P1S2 294 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 FAM83HQ6ZRV2 1179 aaPredicted RBP11.98□□□□□ -0.49
PRPF4-201ENST00000374198 ZNF546Q86UE3 836 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 NAA40Q86UY6 237 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 CPOQ8IVL8 374 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 OSTF1Q92882 214 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 MED8Q96G25 268 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 CMTM3Q96MX0 182 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 RNF122Q9H9V4 155 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 HINT3Q9NQE9 182 aaKnown RBP11.98□□□□□ -0.49
PRPF4-201ENST00000374198 ZDHHC3Q9NYG2 299 aa11.98□□□□□ -0.49
PRPF4-201ENST00000374198 A0A1W2PPK0 400 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 LRIT2A6NDA9 550 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 SAP18O00422 153 aaKnown RBP11.97□□□□□ -0.49
PRPF4-201ENST00000374198 HMGN4O00479 90 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 MT-ND5P03915 603 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 HTR2AP28223 471 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 DCTDP32321 178 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 ACVR1BP36896 505 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 NAE1Q13564 534 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 IER5LQ5T953 404 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 MISPQ8IVT2 679 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 CHST14Q8NCH0 376 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 PHYHIPLQ96FC7 376 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 FAM46AQ96IP4 442 aaKnown RBP11.97□□□□□ -0.49
PRPF4-201ENST00000374198 PGLYRP3Q96LB9 341 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 LHX3Q9UBR4 397 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 TBX21Q9UL17 535 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 LRRC72A6NJI9 287 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 FAM183AA6NL82 134 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 COLCA2A8K830 154 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 GPX4P36969 197 aaPredicted RBP11.97□□□□□ -0.49
PRPF4-201ENST00000374198 GCGRP47871 477 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 PGDP52209 483 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 PGGHGQ32M88 737 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 TMPRSS11BQ86T26 416 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 OR13C5Q8NGS8 318 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 OR6K2Q8NGY2 324 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 PHOSPHO2Q8TCD6 241 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 FBXO32Q969P5 355 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 TMEM41AQ96HV5 264 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 NDC1Q9BTX1 674 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 TMEM185BQ9H7F4 350 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 ASF1BQ9NVP2 202 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 TAS2R10Q9NYW0 307 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 TAAR2Q9P1P5 351 aa11.97□□□□□ -0.49
PRPF4-201ENST00000374198 MBD1Q9UIS9 605 aaPredicted RBP11.97□□□□□ -0.49
PRPF4-201ENST00000374198 HELZP42694 1942 aaKnown RBP11.97□□□□□ -0.49
PRPF4-201ENST00000374198 TRAV14DV4A0A0A6YYC5 116 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 KANTRA0A1W2PQU2 76 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 F2P00734 622 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 TIMP1P01033 207 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 RNF224P0DH78 156 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 XPAP23025 273 aaPredicted RBP11.96□□□□□ -0.49
PRPF4-201ENST00000374198 NFYBP25208 207 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 ARFIP1P53367 373 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 HCCSP53701 268 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 ACTR1AP61163 376 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 PEA15Q15121 130 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 JMJD6Q6NYC1 403 aaPredicted RBP11.96□□□□□ -0.49
PRPF4-201ENST00000374198 FUT10Q6P4F1 479 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 C11orf88Q6PI97 169 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 MMP21Q8N119 569 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 MUC20Q8N307 709 aaPredicted RBP11.96□□□□□ -0.49
PRPF4-201ENST00000374198 STK35Q8TDR2 534 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 ZNF75AQ96N20 296 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 ACSS1Q9NUB1 689 aaPredicted RBP11.96□□□□□ -0.49
PRPF4-201ENST00000374198 ICKQ9UPZ9 632 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 DNAH12Q6ZR08 3092 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 OR14I1A6ND48 311 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 C1orf196B1AJZ1 125 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 KLK3P07288 261 aaPredicted RBP11.96□□□□□ -0.49
PRPF4-201ENST00000374198 ZDHHC11BP0C7U3 371 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 ABOP16442 354 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 ZNF3P17036 446 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 TAS2R43P59537 309 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 SYPL1Q16563 259 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 OR2B11Q5JQS5 317 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 MED27Q6P2C8 311 aa11.96□□□□□ -0.49
PRPF4-201ENST00000374198 TMEM71Q6P5X7 295 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms