RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 SLC44A3Q8N4M1 653 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 OR13C2Q8NGS9 318 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 LGALS14Q8TCE9 139 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 ZNF514Q96K75 400 aaPredicted RBP12.69□□□□□ -0.38
USP49-201ENST00000373006 ZNF416Q9BWM5 594 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 JAM3Q9BX67 310 aa12.69□□□□□ -0.38
USP49-201ENST00000373006 WSB2Q9NYS7 404 aaPredicted RBP12.69□□□□□ -0.38
USP49-201ENST00000373006 SBK2P0C263 348 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 SAGP10523 405 aaPredicted RBP12.68□□□□□ -0.38
USP49-201ENST00000373006 HIST1H1TP22492 207 aaPredicted RBP12.68□□□□□ -0.38
USP49-201ENST00000373006 BCL6P41182 706 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 MAGEB1P43366 347 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 GBX2P52951 348 aaPredicted RBP12.68□□□□□ -0.38
USP49-201ENST00000373006 B2MP61769 119 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 OC90Q02509 493 aaPredicted RBP12.68□□□□□ -0.38
USP49-201ENST00000373006 TMEM64Q6YI46 380 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 CMTM4Q8IZR5 234 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 HAVCR2Q8TDQ0 301 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 ARRDC3Q96B67 414 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 WBP1Q96G27 269 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 LINC00615Q96LM1 132 aaPredicted RBP12.68□□□□□ -0.38
USP49-201ENST00000373006 OR14A2Q96R54 314 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 MENTQ9BUN1 341 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 ZNF69Q9UC07 566 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 ADAM29Q9UKF5 820 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 GPR34Q9UPC5 381 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 OBSL1O75147 1896 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 SCN3AQ9NY46 2000 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 NUP210Q8TEM1 1887 aaPredicted RBP12.68□□□□□ -0.38
USP49-201ENST00000373006 L7N2F9 121 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 FLRT2O43155 660 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 SC5DO75845 299 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 OR5F1O95221 314 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 CLTBP09497 229 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 MPIP34949 423 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 CLDN12P56749 244 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 NTHL1P78549 312 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 NHLRC3Q5JS37 347 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 HES5Q5TA89 166 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 FAM111BQ6SJ93 734 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 ING5Q8WYH8 240 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 HS6ST2Q96MM7 605 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 ACTR6Q9GZN1 396 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 ANKRD19PQ9H560 264 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 HRASLSQ9HDD0 168 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 CAMK2AQ9UQM7 478 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 NPFFR2Q9Y5X5 522 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 RNF215Q9Y6U7 377 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 DENND4CQ5VZ89 1909 aa12.68□□□□□ -0.38
USP49-201ENST00000373006 NPIPA5A0A0B4J1W7 369 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 ZNF98A6NK75 572 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 NPIPA7E9PJI5 369 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 NPIPA8P0DM63 369 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 PSMB1P20618 241 aaKnown RBP12.67□□□□□ -0.38
USP49-201ENST00000373006 CCR9P51686 369 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 CRMP1Q14194 572 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 TCEA2Q15560 299 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 APOOLQ6UXV4 268 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 ZNF836Q6ZNA1 936 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 FRRS1Q6ZNA5 592 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 OR4N5Q8IXE1 308 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 OR52H1Q8NGJ2 320 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 OR52I2Q8NH67 350 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 PDCD1LG2Q9BQ51 273 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 PRSS27Q9BQR3 290 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 REG4Q9BYZ8 158 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 TTYH1Q9H313 450 aaPredicted RBP12.67□□□□□ -0.38
USP49-201ENST00000373006 ADGRL4Q9HBW9 690 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 ZNF443Q9Y2A4 671 aaPredicted RBP12.67□□□□□ -0.38
USP49-201ENST00000373006 SCAMP1O15126 338 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 RD3LP0DJH9 198 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 ANXA7P20073 488 aaKnown RBP12.67□□□□□ -0.38
USP49-201ENST00000373006 PRKAR1BP31321 381 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 TMEM88Q6PEY1 159 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 NHLRC1Q6VVB1 395 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 ZNF433Q8N7K0 673 aaPredicted RBP12.67□□□□□ -0.38
USP49-201ENST00000373006 SMIM4Q8WVI0 70 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 MS4A6EQ96DS6 147 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 SYNPO2LQ9H987 977 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 PRDM7Q9NQW5 492 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 HPF1Q9NWY4 346 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 WDR45Q9Y484 360 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 NPTNQ9Y639 398 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 SESN1Q9Y6P5 492 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 ATG2BQ96BY7 2078 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 CARNS1A5YM72 827 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 FAM86C2PA6NEL3 165 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 CLEC3AO75596 197 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 ATP5A1P25705 553 aaKnown RBP12.67□□□□□ -0.38
USP49-201ENST00000373006 FNTBP49356 437 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 DMKNQ6E0U4 476 aaPredicted RBP12.67□□□□□ -0.38
USP49-201ENST00000373006 OR5M10Q6IEU7 315 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 SLITRK4Q8IW52 837 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 SARGQ9BW04 601 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 CLDND1Q9NY35 253 aa12.67□□□□□ -0.38
USP49-201ENST00000373006 USP36Q9P275 1121 aaKnown RBP12.67□□□□□ -0.38
USP49-201ENST00000373006 CEP290O15078 2479 aa12.66□□□□□ -0.38
USP49-201ENST00000373006 THSD7BQ9C0I4 1608 aa12.66□□□□□ -0.38
USP49-201ENST00000373006 SLC22A31A6NKX4 558 aa12.66□□□□□ -0.38
USP49-201ENST00000373006 BET1O15155 118 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms