RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 FKBP10Q96AY3 582 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 SLCO4A1Q96BD0 722 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 MOAP1Q96BY2 351 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 OR7D2Q96RA2 312 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 WDR77Q9BQA1 342 aaPredicted RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 NUDT9Q9BW91 350 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 ACTRT3Q9BYD9 372 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 RAD21L1Q9H4I0 556 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 WDR54Q9H977 334 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 FOLH1BQ9HBA9 442 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 A4GALTQ9NPC4 353 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 ADAP2Q9NPF8 381 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 C14orf105Q9NVL8 296 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 DDX18Q9NVP1 670 aaKnown RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 NKX1-2Q9UD57 310 aaPredicted RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 BCAP29Q9UHQ4 241 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 C3orf18Q9UK00 162 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 PADI1Q9ULC6 663 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 FAF1Q9UNN5 650 aaPredicted RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 GXYLT2A0PJZ3 443 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 RGS10O43665 173 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 IGKV3-11P04433 115 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 CHRM4P08173 479 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 VSIG10L2P0DP72 767 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 KDELR2P33947 212 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 GZMKP49863 264 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 KHKP50053 298 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 SLC37A1P57057 533 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 RPS18P62269 152 aaKnown RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 CDK6Q00534 326 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 EPS8Q12929 822 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 RIPK1Q13546 671 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 VEZF1Q14119 521 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 NCF4Q15080 339 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 ELAVL1Q15717 326 aaKnown RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 ZNF630Q2M218 657 aaPredicted RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 HEPHL1Q6MZM0 1159 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 CDC73Q6P1J9 531 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 MTFR2Q6P444 385 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 ERICH5Q6P6B1 374 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 NPSR1Q6W5P4 371 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 SPATA24Q86W54 205 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 LINC00346Q8IVM7 164 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 ADGRG5Q8IZF4 528 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 TAGAPQ8N103 731 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 ENDOVQ8N8Q3 282 aaKnown RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 C11orf65Q8NCR3 313 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 SLC2A12Q8TD20 617 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 ZFAND2BQ8WV99 257 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 CANT1Q8WVQ1 401 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 PYDC1Q8WXC3 89 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 FIG4Q92562 907 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 CDS1Q92903 461 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 TAMM41Q96BW9 452 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 PPP1R14BQ96C90 147 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 C8orf44Q96CB5 159 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 ZG16BQ96DA0 208 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 DUS3LQ96G46 650 aaKnown RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 TMEM19Q96HH6 336 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 FBXL20Q96IG2 436 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 VSTM2LQ96N03 204 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 MS4A4EQ96PG1 132 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 PELOQ9BRX2 385 aaKnown RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 OR8D2Q9GZM6 311 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 OR10A2Q9H208 303 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 TMEM38AQ9H6F2 299 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 GORASP2Q9H8Y8 452 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 POLR1BQ9H9Y6 1135 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 S100A14Q9HCY8 104 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 ASCL3Q9NQ33 180 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 LIN7CQ9NUP9 197 aaKnown RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 DCAF13Q9NV06 445 aaKnown RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 ZNF223Q9UK11 482 aaPredicted RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 ERVK-19Q9WJR5 959 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 PTRH2Q9Y3E5 179 aaKnown RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 HEMK1Q9Y5R4 338 aaPredicted RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 LOC102723996A0A087X1L8 192 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 LOC101059948A0A1B0GTJ6 334 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 A8MVJ9 347 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CDRT15L2A8MXV6 281 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 C9J4A7 227 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 IFNL4K9M1U5 179 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 M0QX08 132 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 SLC28A2O43868 658 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 FCMRO60667 390 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 NKX2-2O95096 273 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 ATP6V1G2O95670 118 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 SERPINA1P01009 418 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 IGKV1D-16P01601 117 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 ALOX5P09917 674 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 RAB40ALP0C0E4 278 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 TCN2P20062 427 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 AQP1P29972 269 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 GABRA3P34903 492 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 SELENOPP49908 381 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 MRPS22P82650 360 aaKnown RBP3.25□□□□□ -1.89
MCF2-202ENST00000370573 PSG6Q00889 435 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 RBBP4Q09028 425 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 CCNJQ5T5M9 372 aa3.25□□□□□ -1.89
MCF2-202ENST00000370573 C6orf163Q5TEZ5 329 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms