RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 SLC25A37Q9NYZ2 338 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 WWOXQ9NZC7 414 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 SEC14L4Q9UDX3 406 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 SH3BGRL2Q9UJC5 107 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 MRPS33Q9Y291 106 aaKnown RBP13.67□□□□□ -0.22
LMO4-201ENST00000370542 ZNF407Q9C0G0 2248 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 MYO1GB0I1T2 1018 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 ADAMDEC1O15204 470 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 MITFO75030 526 aaPredicted RBP13.66□□□□□ -0.22
LMO4-201ENST00000370542 ULK1O75385 1050 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 ZFAND5O76080 213 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 CLDN14O95500 239 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 ABCB1P08183 1280 aaPredicted RBP13.66□□□□□ -0.22
LMO4-201ENST00000370542 PIPP12273 146 aaPredicted RBP13.66□□□□□ -0.22
LMO4-201ENST00000370542 ARL1P40616 181 aaPredicted RBP13.66□□□□□ -0.22
LMO4-201ENST00000370542 RGS6P49758 472 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 MEOX1P50221 254 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 NKX2-5P52952 324 aaPredicted RBP13.66□□□□□ -0.22
LMO4-201ENST00000370542 P2RX3P56373 397 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 IL1RL1Q01638 556 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 RUNX1T1Q06455 604 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 ASAH1Q13510 395 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 RFTN2Q52LD8 501 aaPredicted RBP13.66□□□□□ -0.22
LMO4-201ENST00000370542 FAM209AQ5JX71 171 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 C10orf62Q5T681 223 aaPredicted RBP13.66□□□□□ -0.22
LMO4-201ENST00000370542 ZNF793Q6ZN11 406 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 LRRC70Q7Z2Q7 622 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 MDGA2Q7Z553 956 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 ENTHD1Q8IYW4 607 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 ZNF295-AS1Q8N0V1 137 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 CYP4Z2PQ8N1L4 340 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 LIX1Q8N485 282 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 GDPD1Q8N9F7 314 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 SPERTQ8NA61 448 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 MORN4Q8NDC4 146 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 SRFBP1Q8NEF9 429 aaKnown RBP13.66□□□□□ -0.22
LMO4-201ENST00000370542 OR8K3Q8NH51 312 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 PTPMT1Q8WUK0 201 aaPredicted RBP13.66□□□□□ -0.22
LMO4-201ENST00000370542 ESAMQ96AP7 390 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 MTFMTQ96DP5 389 aaKnown RBP13.66□□□□□ -0.22
LMO4-201ENST00000370542 KCNC2Q96PR1 638 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 DHRS9Q9BPW9 319 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 MS4A8Q9BY19 250 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 CD244Q9BZW8 370 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 SMURF1Q9HCE7 757 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 PNO1Q9NRX1 252 aaKnown RBP13.66□□□□□ -0.22
LMO4-201ENST00000370542 EXD2Q9NVH0 621 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 ADPRHL2Q9NX46 363 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 MRPL39Q9NYK5 338 aaKnown RBP13.66□□□□□ -0.22
LMO4-201ENST00000370542 MYOTQ9UBF9 498 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 DNAJC13O75165 2243 aa13.66□□□□□ -0.22
LMO4-201ENST00000370542 CCDC182A6NF36 153 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 CCRL2O00421 344 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 OR7A17O14581 309 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 SEC14L5O43304 696 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 ZNF682O95780 498 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 HOXB9P17482 250 aaPredicted RBP13.65□□□□□ -0.22
LMO4-201ENST00000370542 PTBP1P26599 531 aaKnown RBP eCLIP13.65□□□□□ -0.22
LMO4-201ENST00000370542 CERS1P27544 350 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 KDELR2P33947 212 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 PTGER1P34995 402 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 IGLV3-21P80748 117 aaPredicted RBP13.65□□□□□ -0.22
LMO4-201ENST00000370542 HSF1Q00613 529 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 VMACQ2NL98 169 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 TBRG1Q3YBR2 411 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 FBXO48Q5FWF7 155 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 XKR6Q5GH73 641 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 SPANXN4Q5MJ08 99 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 CCDC28AQ8IWP9 274 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 OR8H2Q8N162 312 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 VWA5B2Q8N398 1253 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 TMEM156Q8N614 296 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 C7orf57Q8NEG2 295 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 OR9Q1Q8NGQ5 310 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 FAM57AQ8TBR7 257 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 ZFAND1Q8TCF1 268 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 DAZLQ92904 295 aaKnown RBP13.65□□□□□ -0.22
LMO4-201ENST00000370542 F2RL3Q96RI0 385 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 ROGDIQ9GZN7 287 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 ENKD1Q9H0I2 346 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 IPPKQ9H8X2 491 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 ACOXLQ9NUZ1 547 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 THUMPD1Q9NXG2 353 aaKnown RBP13.65□□□□□ -0.22
LMO4-201ENST00000370542 FBXW2Q9UKT8 454 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 HRH3Q9Y5N1 445 aa13.65□□□□□ -0.22
LMO4-201ENST00000370542 IQCMA0A1B0GVH7 501 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 MEIOCA2RUB1 952 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 C19orf84I3L1E1 186 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 PRRG2O14669 202 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 ZNHIT1O43257 154 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 ABOP16442 354 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 ENDOUP21128 410 aaKnown RBP13.64□□□□□ -0.23
LMO4-201ENST00000370542 ATP5A1P25705 553 aaKnown RBP13.64□□□□□ -0.23
LMO4-201ENST00000370542 KIR3DL1P43629 444 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 HTR6P50406 440 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 RORCP51449 518 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 SSR4P51571 173 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 ARFIP1P53367 373 aa13.64□□□□□ -0.23
LMO4-201ENST00000370542 AP2S1P53680 142 aaPredicted RBP13.64□□□□□ -0.23
LMO4-201ENST00000370542 IRF8Q02556 426 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms