RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 SYT5O00445 386 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 MRASO14807 208 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 CTAG2O75638 210 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 TNFSF13O75888 250 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 KRT34O76011 436 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 RCBTB2O95199 551 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 SYNGR4O95473 234 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 OPN1SWP03999 348 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 GUSBP08236 651 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 TFPIP10646 304 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 PTNP21246 168 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 CPA2P48052 419 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 IST1P53990 364 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 EEFSECP57772 596 aaKnown RBP13.12□□□□□ -0.31
SF3B5-201ENST00000367569 EEF1A1P68104 462 aaKnown RBP13.12□□□□□ -0.31
SF3B5-201ENST00000367569 CDK6Q00534 326 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 SCARB2Q14108 478 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 ZNF239Q16600 458 aaKnown RBP13.12□□□□□ -0.31
SF3B5-201ENST00000367569 GLIPR1L2Q4G1C9 344 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 RUNDC3AQ59EK9 446 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 RABL3Q5HYI8 236 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 C3orf33Q6P1S2 294 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 SERPINA11Q86U17 422 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 BBS10Q8TAM1 723 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 ABHD3Q8WU67 409 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 ST8SIA1Q92185 356 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 ELAC2Q9BQ52 826 aaKnown RBP13.12□□□□□ -0.31
SF3B5-201ENST00000367569 MTHFD2LQ9H903 347 aaPredicted RBP13.12□□□□□ -0.31
SF3B5-201ENST00000367569 HHATLQ9HCP6 504 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 ACER3Q9NUN7 267 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 CALML5Q9NZT1 146 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 CAPN7Q9Y6W3 813 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 ABCA4P78363 2273 aa13.12□□□□□ -0.31
SF3B5-201ENST00000367569 A0A0G2JPF8 293 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 CDHR4A6H8M9 788 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 CFAP73A6NFT4 308 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 EVPLLA8MZ36 301 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 HNRNPCL2B2RXH8 293 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 HNRNPCL3B7ZW38 293 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 FXYD1O00168 92 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 HNRNPCL1O60812 293 aaKnown RBP13.11□□□□□ -0.31
SF3B5-201ENST00000367569 PGM3O95394 542 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 PLGP00747 810 aaPredicted RBP13.11□□□□□ -0.31
SF3B5-201ENST00000367569 PABPC4LP0CB38 370 aaKnown RBP13.11□□□□□ -0.31
SF3B5-201ENST00000367569 HNRNPCL4P0DMR1 293 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 BMP2P12643 396 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 PPIBP23284 216 aaKnown RBP13.11□□□□□ -0.31
SF3B5-201ENST00000367569 KIR2DL3P43628 341 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 GNGT1P63211 74 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 IRX1P78414 480 aaPredicted RBP13.11□□□□□ -0.31
SF3B5-201ENST00000367569 EPS8Q12929 822 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 GNA13Q14344 377 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 TRMT5Q32P41 509 aaKnown RBP13.11□□□□□ -0.31
SF3B5-201ENST00000367569 MMEL1Q495T6 779 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 SLC25A53Q5H9E4 307 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 ZNF311Q5JNZ3 666 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 METTL21CQ5VZV1 264 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 ESPNLQ6ZVH7 1005 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 SPATA21Q7Z572 469 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 BTLAQ7Z6A9 289 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 PTOV1Q86YD1 416 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 DPP10Q8N608 796 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 OSTF1Q92882 214 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 RCN3Q96D15 328 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 ANKRD27Q96NW4 1050 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 UCN2Q96RP3 112 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 CCDC106Q9BWC9 280 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 SFXN3Q9BWM7 321 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 LIME1Q9H400 295 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 C12orf49Q9H741 205 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 RNF122Q9H9V4 155 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 CACYBPQ9HB71 228 aaKnown RBP13.11□□□□□ -0.31
SF3B5-201ENST00000367569 EXOSC3Q9NQT5 275 aaKnown RBP13.11□□□□□ -0.31
SF3B5-201ENST00000367569 TMEM45AQ9NWC5 275 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 GALNT8Q9NY28 637 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 CRIM1Q9NZV1 1036 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 GMPR2Q9P2T1 348 aaKnown RBP13.11□□□□□ -0.31
SF3B5-201ENST00000367569 PACSIN3Q9UKS6 424 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 MCTS1Q9ULC4 181 aaKnown RBP13.11□□□□□ -0.31
SF3B5-201ENST00000367569 ZNF175Q9Y473 711 aa13.11□□□□□ -0.31
SF3B5-201ENST00000367569 TMEM72A0PK05 275 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 ADAMDEC1O15204 470 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 DNAJA2O60884 412 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 FCGR2AP12318 317 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 GPX2P18283 190 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 ENPP1P22413 925 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 TACR3P29371 465 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 LSP1P33241 339 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 OPRM1P35372 400 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 KIR2DL2P43627 348 aaPredicted RBP13.1□□□□□ -0.31
SF3B5-201ENST00000367569 CARD18P57730 90 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 LARS2Q15031 903 aaKnown RBP13.1□□□□□ -0.31
SF3B5-201ENST00000367569 ADRM1Q16186 407 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 SYT14P1Q58G82 188 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 RNF220Q5VTB9 566 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.1□□□□□ -0.31
SF3B5-201ENST00000367569 TMEM234Q8WY98 164 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 ARL5BQ96KC2 179 aa13.1□□□□□ -0.31
SF3B5-201ENST00000367569 GPATCH1Q9BRR8 931 aaKnown RBP13.1□□□□□ -0.31
SF3B5-201ENST00000367569 PRR14Q9BWN1 585 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms