RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ATP1B1P05026 303 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 NDUFV2P19404 249 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 ALKBH1Q13686 389 aaKnown RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 MLC1Q15049 377 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 HECTD2Q5U5R9 776 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 WDR77Q9BQA1 342 aaPredicted RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 NXT1Q9UKK6 140 aaKnown RBP3.53□□□□□ -1.84
SYNE1-207ENST00000367255 MED31Q9Y3C7 131 aa3.53□□□□□ -1.84
SYNE1-207ENST00000367255 GLOD5A6NK44 160 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 SOD3P08294 240 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 AKAIN1P0CW23 69 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 MECP2P51608 486 aaKnown RBP3.53□□□□□ -1.85
SYNE1-207ENST00000367255 EPHB3P54753 998 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 RELQ04864 619 aaPredicted RBP3.53□□□□□ -1.85
SYNE1-207ENST00000367255 CES4AQ5XG92 561 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 TRAT1Q6PIZ9 186 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 SUCNR1Q9BXA5 334 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 OR6C2Q9NZP2 312 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 MYH10P35580 1976 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 H3BQ06 376 aaPredicted RBP3.53□□□□□ -1.85
SYNE1-207ENST00000367255 ST8SIA5O15466 376 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 SRPX2O60687 465 aaPredicted RBP3.53□□□□□ -1.85
SYNE1-207ENST00000367255 HNF1BP35680 557 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 CD200P41217 278 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 HNRNPA0Q13151 305 aaKnown RBP3.53□□□□□ -1.85
SYNE1-207ENST00000367255 OR8B8Q15620 311 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 ISCA2Q86U28 154 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 PPP1R35Q8TAP8 253 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 POFUT1Q9H488 388 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 CACNG4Q9UBN1 327 aa3.53□□□□□ -1.85
SYNE1-207ENST00000367255 F5H0A9 414 aaPredicted RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 USP17L7P0C7H9 530 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 HIST1H1BP16401 226 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PTGIRP43119 386 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 AFF3P51826 1226 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SLC16A1P53985 500 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ATP6V1FQ16864 119 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 FAM219AQ8IW50 185 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PRR14Q9BWN1 585 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TMPRSS4Q9NRS4 437 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TBX21Q9UL17 535 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PDE6DO43924 150 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TPST2O60704 377 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 AMHP03971 560 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SLC25A4P12235 298 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CFPP27918 469 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 RAB38P57729 211 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CRTC1Q6UUV9 634 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 C4orf32Q8N8J7 132 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TCF25Q9BQ70 676 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PECRQ9BY49 303 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TESQ9UGI8 421 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 OSGIN1Q9UJX0 560 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SLCO1B1Q9Y6L6 691 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 LMO7Q8WWI1 1683 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 VENTXO95231 258 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CLCN7P51798 805 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 MRPL49Q13405 166 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 GLYATL2Q8WU03 294 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CELF2O95319 508 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CCR8P51685 355 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CCNIQ14094 377 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 DSC3Q14574 896 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 GLT6D1Q7Z4J2 308 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ZDHHC21Q8IVQ6 265 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 OR4Q3Q8NH05 313 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TANKQ92844 425 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 EXOSC3Q9NQT5 275 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 HAO2Q9NYQ3 351 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TAS2R5Q9NYW4 299 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 EGFL7Q9UHF1 273 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PGLSO95336 258 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 HNRNPA1P09651 372 aaKnown RBP eCLIP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 VAMP3Q15836 100 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 HNRNPA1L2Q32P51 320 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 OLFML2AQ68BL7 652 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 FGF14Q92915 247 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TSPOAP1O95153 1857 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CPNE3O75131 537 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 NFATC1O95644 943 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ARSDP51689 593 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 MC2RQ01718 297 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 LRIT3Q3SXY7 679 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 C4orf46Q504U0 113 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 OR4D5Q8NGN0 318 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 OR5M1Q8NGP8 315 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 OR6F1Q8NGZ6 308 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 UBXN10Q96LJ8 280 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SCUBE2Q9NQ36 999 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 MYOTQ9UBF9 498 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM262E9PQX1 116 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SLC25A14O95258 325 aaPredicted RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TPBGQ13641 420 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 LIPIQ6XZB0 460 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 DENND1CQ8IV53 801 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SLC38A6Q8IZM9 456 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 GPR156Q8NFN8 814 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CD200R1Q8TD46 325 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TAAR9Q96RI9 348 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ENPP4Q9Y6X5 453 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms