RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 MNDAP41218 407 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 P2RY2P41231 377 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 GMFBP60983 142 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 BTG1P62324 171 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 SHC2P98077 582 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 NOGQ13253 232 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 AMZ1Q400G9 498 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 SCGB2B2Q4G0G5 96 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 TMEM35AQ53FP2 167 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 AADACL4Q5VUY2 407 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 ELP2Q6IA86 826 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 KIAA1211LQ6NV74 962 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 THSD4Q6ZMP0 1018 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 JAZF1Q86VZ6 243 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 MS4A15Q8N5U1 240 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 METTL27Q8N6F8 245 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-203ENST00000358528 DNAAF1Q8NEP3 725 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 OR52I2Q8NH67 350 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 MS4A6EQ96DS6 147 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 RSPO3Q9BXY4 272 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-203ENST00000358528 C20orf85Q9H1P6 137 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 NOX4Q9NPH5 578 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 CREBZFQ9NS37 354 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 FBXO34Q9NWN3 711 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 KLK11Q9UBX7 282 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 FARSAQ9Y285 508 aaKnown RBP6.1□□□□□ -1.43
CSDE1-203ENST00000358528 CA5BQ9Y2D0 317 aa6.1□□□□□ -1.43
CSDE1-203ENST00000358528 CENPVL1A0A0U1RR11 272 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 C17orf113A0A1B0GUU1 675 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 TVP23AA6NH52 213 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ELOA3DA6NLF2 546 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ATP6V1G2-DDX39BF2Z307 99 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 SGK494L7N484 410 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 PEX14O75381 377 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 HPXP02790 462 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 SBK2P0C263 348 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 RPS27P42677 84 aaKnown RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 RAD52P43351 418 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 PTH2RP49190 550 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ERVK-25P63136 954 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 BIKQ13323 160 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 DECR1Q16698 335 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 COL28A1Q2UY09 1125 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 DEFB110Q30KQ9 67 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ELOA3BQ3SY89 546 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 BEX5Q5H9J7 111 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 YOD1Q5VVQ6 348 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 SLC22A10Q63ZE4 541 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 LAMTOR1Q6IAA8 161 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 FAM198BQ6UWH4 519 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF627Q7L945 461 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 UBE3DQ7Z6J8 389 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF687Q8N1G0 1237 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ELOA3Q8NG57 546 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 SYNPRQ8TBG9 265 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 WFIKKN2Q8TEU8 576 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ADAMTS14Q8WXS8 1223 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 DIO2Q92813 273 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 MRGPRX3Q96LB0 322 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 EXO5Q9H790 373 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 EMC7Q9NPA0 242 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 SCP2D1Q9UJQ7 156 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ACSL5Q9ULC5 683 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ADAM18Q9Y3Q7 739 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 SCN8AQ9UQD0 1980 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF593O00488 134 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 DOK2O60496 412 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ITGA10O75578 1167 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 KLHL18O94889 574 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 UBL3O95164 117 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 GTF2F2P13984 249 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 PSMB1P20618 241 aaKnown RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF10P21506 573 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ITPKBP27987 946 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 PSMD4P55036 377 aaKnown RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 TNK1Q13470 666 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 HTR4Q13639 388 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 DCST2Q5T1A1 773 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 CD276Q5ZPR3 534 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ARMC6Q6NXE6 501 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 SLC48A1Q6P1K1 146 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ASPGQ86U10 573 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 OOSP2Q86WS3 158 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 POGLUT1Q8NBL1 392 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ZBTB44Q8NCP5 570 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 OR52B4Q8NGK2 314 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 OR6N2Q8NGY6 317 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 OR56B4Q8NH76 319 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 RBPMSQ93062 196 aaKnown RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 CAPNS2Q96L46 248 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 MS4A4EQ96PG1 132 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 CNN2Q99439 309 aaKnown RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF436Q9C0F3 470 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 MKKSQ9NPJ1 570 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 MED11Q9P086 117 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 KCMF1Q9P0J7 381 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 KLHL9Q9P2J3 617 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 APOBEC3BQ9UH17 382 aaKnown RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 COLEC10Q9Y6Z7 277 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 CEP290O15078 2479 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms