RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 ZNF550Q7Z398 422 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 PATL1Q86TB9 770 aaKnown RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 C10orf111Q8N326 155 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 OR5M9Q8NGP3 310 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 SLC25A43Q8WUT9 341 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ASB5Q8WWX0 329 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 MAL2Q969L2 176 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CCDC120Q96HB5 630 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 REXO5Q96IC2 774 aaKnown RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 RNF145Q96MT1 663 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ZFP3Q96NJ6 502 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF607Q96SK3 696 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 TIMP4Q99727 224 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 GPATCH1Q9BRR8 931 aaKnown RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 THUMPD3Q9BV44 507 aaKnown RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 PINK1Q9BXM7 581 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 QRSL1Q9H0R6 528 aaKnown RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CALHM2Q9HA72 323 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 EFCAB1Q9HAE3 211 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 CLCF1Q9UBD9 225 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 TAGLN3Q9UI15 199 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 SH3BGRL2Q9UJC5 107 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 VDAC3Q9Y277 283 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 RPH3AQ9Y2J0 694 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF175Q9Y473 711 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 FAM215AQ9Y5M1 114 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 SPIN1Q9Y657 262 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF407Q9C0G0 2248 aa3.58□□□□□ -1.84
CNOT4-202ENST00000356162 KRTAP9-6A0A140TA67 174 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CDHR4A6H8M9 788 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 MBD3L4A6NDZ8 208 aaPredicted RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 MBD3L3A6NE82 208 aaPredicted RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CFAP73A6NFT4 308 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 WIPF3A6NGB9 483 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 MBD3L5A6NJ08 208 aaPredicted RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 H3BML4 177 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SYT5O00445 386 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 BCAS1O75363 584 aaPredicted RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CYP7B1O75881 506 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 FCGR2AP12318 317 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 GP1BBP13224 206 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 IL7RP16871 459 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 TCEA1P23193 301 aaKnown RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ME2P23368 584 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 PSMA4P25789 261 aaKnown RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 HTR3AP46098 478 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 NUDT2P50583 147 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 NUP107P57740 925 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ART3Q13508 389 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 KRT72Q14CN4 511 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ADRM1Q16186 407 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 VMACQ2NL98 169 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF311Q5JNZ3 666 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 RTL6Q6ICC9 239 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 NANOGP8Q6NSW7 305 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 C3orf33Q6P1S2 294 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF585AQ6P3V2 769 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CBLN3Q6UW01 205 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 PLEKHM3Q6ZWE6 761 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CCDC80Q76M96 950 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 GRINAQ7Z429 371 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ADGRE4PQ86SQ3 457 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 VRK2Q86Y07 508 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 MICU2Q8IYU8 434 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 MARVELD2Q8N4S9 558 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 OR10A6Q8NH74 314 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 OR2V1Q8NHB1 315 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 MBD3L2Q8NHZ7 208 aaPredicted RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 FBXO27Q8NI29 283 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ITLN2Q8WWU7 325 aaPredicted RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CNOT9Q92600 299 aaKnown RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ADGRG7Q96K78 797 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 LRRC37BQ96QE4 947 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 HOPXQ9BPY8 73 aaPredicted RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 KLHDC3Q9BQ90 382 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ECSITQ9BQ95 431 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 TUBA1CQ9BQE3 449 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SLC39A3Q9BRY0 314 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 NANOGQ9H9S0 305 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 PAQR5Q9NXK6 330 aaPredicted RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 NDE1Q9NXR1 346 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ABCD2Q9UBJ2 740 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 TESQ9UGI8 421 aaKnown RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ADAM21Q9UKJ8 722 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 GTF3C1Q12789 2109 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF462Q96JM2 2506 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 LOC100653049A0A140TA62 436 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CLCA1A8K7I4 914 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 HSPB2A8KAH6 182 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 AP3D1O14617 1153 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 AIM2O14862 343 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ZNHIT1O43257 154 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 GMFGO60234 142 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SERPINB7O75635 380 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 KRT34O76011 436 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 EPPINO95925 133 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 GLI4P10075 376 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CD247P20963 164 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 FKBP2P26885 142 aaKnown RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CHRNB4P30926 498 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms