RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 DUSP5Q16690 384 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 C3P1Q6ZMU1 363 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 FCRLAQ7L513 359 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 PXYLP1Q8TE99 480 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 CNOT9Q92600 299 aaKnown RBP9.38□□□□□ -0.91
PTPRA-203ENST00000356147 OTUB2Q96DC9 234 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 TOE1Q96GM8 510 aaKnown RBP9.38□□□□□ -0.91
PTPRA-203ENST00000356147 HS6ST2Q96MM7 605 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 INSM2Q96T92 566 aaPredicted RBP9.38□□□□□ -0.91
PTPRA-203ENST00000356147 SARGQ9BW04 601 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 C1QTNF2Q9BXJ5 285 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 CLDND1Q9NY35 253 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 APOBEC3BQ9UH17 382 aaKnown RBP9.38□□□□□ -0.91
PTPRA-203ENST00000356147 GNG8Q9UK08 70 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 FBXL2Q9UKC9 423 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 COPS3Q9UNS2 423 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 GON4LQ3T8J9 2241 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 hCG_1807616A0A1W2PRN6 198 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 MEIS3P1A6NDR6 274 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 IGLON5A6NGN9 336 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 TBX19O60806 448 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 PPM1BO75688 479 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 CXCL14O95715 111 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 F3P13726 295 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 CTRB1P17538 263 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 MPIP34949 423 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 NUP62P37198 522 aaPredicted RBP9.38□□□□□ -0.91
PTPRA-203ENST00000356147 MMP15P51511 669 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 ZNF136P52737 540 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 HTR4Q13639 388 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 TRMT12Q53H54 448 aaKnown RBP9.38□□□□□ -0.91
PTPRA-203ENST00000356147 CTRB2Q6GPI1 263 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 ABHD17CQ6PCB6 329 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 GID4Q8IVV7 300 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 MEIOBQ8N635 442 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 BOLLQ8N9W6 283 aaKnown RBP9.38□□□□□ -0.91
PTPRA-203ENST00000356147 DNAAF1Q8NEP3 725 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 OR56A1Q8NGH5 318 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 TMEM239Q8WW34 195 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 ZNRF4Q8WWF5 429 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 PTCHD1Q96NR3 888 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 TNFRSF13CQ96RJ3 184 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 PELI2Q9HAT8 420 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 NFKBIL1Q9UBC1 381 aaPredicted RBP9.38□□□□□ -0.91
PTPRA-203ENST00000356147 POMT2Q9UKY4 750 aa9.38□□□□□ -0.91
PTPRA-203ENST00000356147 NUP210Q8TEM1 1887 aaPredicted RBP9.37□□□□□ -0.91
PTPRA-203ENST00000356147 A0A1B0GVI7 797 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 A0A1B0GVT2 93 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 TSPAN11A1L157 253 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 CACNB4O00305 520 aaPredicted RBP9.37□□□□□ -0.91
PTPRA-203ENST00000356147 KDM4BO94953 1096 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 TMIGD3P0DMS9 266 aaPredicted RBP9.37□□□□□ -0.91
PTPRA-203ENST00000356147 FGL2Q14314 439 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 GRM7Q14831 915 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 ODF4Q2M2E3 257 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 C2orf68Q2NKX9 166 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 LINC00303Q3SY05 128 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 MRPL2Q5T653 305 aaKnown RBP9.37□□□□□ -0.91
PTPRA-203ENST00000356147 OTPQ5XKR4 325 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 ATRAIDQ6UW56 229 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 NRSN1Q8IZ57 195 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 ESX1Q8N693 406 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 OR52E2Q8NGJ4 325 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 MARVELD3Q96A59 401 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 KCTD12Q96CX2 325 aaKnown RBP9.37□□□□□ -0.91
PTPRA-203ENST00000356147 WBP1Q96G27 269 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 LRIG1Q96JA1 1093 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 GINS4Q9BRT9 223 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 EPHX3Q9H6B9 360 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 NOX4Q9NPH5 578 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 PCDHGA5Q9Y5G8 931 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 COL4A6Q14031 1691 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 FXYD6-FXYD2A0A087WZ82 144 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 TRBV2A0A0J9YWF9 115 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 FAM86C2PA6NEL3 165 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 C4orf47A7E2U8 309 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 HIDE1A8MVS5 230 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 SYT5O00445 386 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 KHNYNO15037 678 aaKnown RBP9.37□□□□□ -0.91
PTPRA-203ENST00000356147 PCDH8O95206 1070 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 ASGR2P07307 311 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 ANXA11P50995 505 aaKnown RBP9.37□□□□□ -0.91
PTPRA-203ENST00000356147 PSMA6P60900 246 aaKnown RBP9.37□□□□□ -0.91
PTPRA-203ENST00000356147 SP3Q02447 781 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 PRDX1Q06830 199 aaKnown RBP9.37□□□□□ -0.91
PTPRA-203ENST00000356147 OR1Q1Q15612 314 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 SLC48A1Q6P1K1 146 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 C17orf107Q6ZR85 190 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 ADGRG3Q86Y34 549 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 RELL2Q8NC24 303 aaPredicted RBP9.37□□□□□ -0.91
PTPRA-203ENST00000356147 BPIFA2Q96DR5 249 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 GIMAP5Q96F15 307 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 PELI1Q96FA3 418 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 GAL3ST1Q99999 423 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 FXYD6Q9H0Q3 95 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 NOX3Q9HBY0 568 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 SLC6A20Q9NP91 592 aa9.37□□□□□ -0.91
PTPRA-203ENST00000356147 MRPS30Q9NP92 439 aaKnown RBP9.37□□□□□ -0.91
PTPRA-203ENST00000356147 MBNL1Q9NR56 388 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms