RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 FNDC7Q5VTL7 733 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 NUP210LQ5VU65 1888 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 CD200R1LQ6Q8B3 271 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 ZNF322Q6U7Q0 402 aaPredicted RBP15.33■□□□□ 0.04
SAMM50-201ENST00000350028 MAMSTRQ6ZN01 415 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 CCDC190Q86UF4 302 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 PARP16Q8N5Y8 322 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 SIRT6Q8N6T7 355 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 ZNF321PQ8N8H1 164 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 SLC2A12Q8TD20 617 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 ZNF721Q8TF20 911 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 SPRYD4Q8WW59 207 aaPredicted RBP15.33■□□□□ 0.04
SAMM50-201ENST00000350028 CLIP3Q96DZ5 547 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 CEP19Q96LK0 163 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 KCTD7Q96MP8 289 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 LRFN5Q96NI6 719 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 DPYSL5Q9BPU6 564 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 SLC19A3Q9BZV2 496 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 OR8D2Q9GZM6 311 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 NXF5Q9H1B4 397 aaKnown RBP15.33■□□□□ 0.04
SAMM50-201ENST00000350028 ZNF768Q9H5H4 540 aaKnown RBP15.33■□□□□ 0.04
SAMM50-201ENST00000350028 MED20Q9H944 212 aa15.33■□□□□ 0.04
SAMM50-201ENST00000350028 EXOSC3Q9NQT5 275 aaKnown RBP15.33■□□□□ 0.04
SAMM50-201ENST00000350028 CCDC163A0A0D9SF12 145 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 A0A1B0GX78 115 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 SCDO00767 359 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 TOX3O15405 576 aaPredicted RBP15.32■□□□□ 0.04
SAMM50-201ENST00000350028 CDRT1O95170 752 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 DDAH2O95865 285 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 GAAP10253 952 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 HOXA6P31267 233 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 FHL1Q13642 323 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 SPANXN2Q5MJ10 180 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 C22orf42Q6IC83 251 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 WBP2NLQ6ICG8 309 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 SNX29P2Q8IUI4 249 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 TMEM203Q969S6 136 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 C3orf49Q96BT1 292 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 ZNF501Q96CX3 271 aaPredicted RBP15.32■□□□□ 0.04
SAMM50-201ENST00000350028 TEAD3Q99594 435 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 HCAR1Q9BXC0 346 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 BARHL1Q9BZE3 327 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 ASB6Q9NWX5 421 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 TOR4AQ9NXH8 423 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 QPCTLQ9NXS2 382 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 NCOR1O75376 2440 aa15.32■□□□□ 0.04
SAMM50-201ENST00000350028 IQCMA0A1B0GVH7 501 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 CCDC182A6NF36 153 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 C12orf71A8MTZ7 269 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 CTDSP2O14595 271 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 SNX4O95219 450 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 UTS2O95399 124 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 IGF2P01344 180 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 UBL4AP11441 157 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 MYF5P13349 255 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 PNLIPP16233 465 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 TGM1P22735 817 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 NOS3P29474 1203 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 PSMD7P51665 324 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 GPR50Q13585 617 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 ZNF791Q3KP31 576 aaPredicted RBP15.31■□□□□ 0.04
SAMM50-201ENST00000350028 KLHL12Q53G59 568 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 ARHGAP40Q5TG30 622 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 PRAMEF17Q5VTA0 474 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 LYSMD4Q5XG99 296 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 ZNF554Q86TJ5 538 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 GALNT6Q8NCL4 622 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 OR14A16Q8NHC5 309 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 DAZLQ92904 295 aaKnown RBP15.31■□□□□ 0.04
SAMM50-201ENST00000350028 KISS1RQ969F8 398 aaPredicted RBP15.31■□□□□ 0.04
SAMM50-201ENST00000350028 ADIPOR1Q96A54 375 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 SLC25A46Q96AG3 418 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 CCDC74AQ96AQ1 378 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 LMF1Q96S06 567 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 PHOX2BQ99453 314 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 NUDT9Q9BW91 350 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 FGF21Q9NSA1 209 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 HAO2Q9NYQ3 351 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 KLHL21Q9UJP4 597 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 DAPL1A0PJW8 107 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 FUOMA2VDF0 154 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 GTPBP1O00178 669 aaKnown RBP15.31■□□□□ 0.04
SAMM50-201ENST00000350028 OR7A10O76100 309 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 LALBAP00709 142 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 PNMTP11086 282 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 SLC2A5P22732 501 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 BCAP31P51572 246 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 RPS7P62081 194 aaKnown RBP15.31■□□□□ 0.04
SAMM50-201ENST00000350028 SQSTM1Q13501 440 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 CRMP1Q14194 572 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 HLA-DQA1Q5Y7H0 255 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 TMEM71Q6P5X7 295 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 PLEKHG7Q6ZR37 379 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 LYSMD2Q8IV50 215 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 PHOSPHO1Q8TCT1 267 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 ERMAPQ96PL5 475 aaPredicted RBP15.31■□□□□ 0.04
SAMM50-201ENST00000350028 SLC30A2Q9BRI3 323 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 DUSP23Q9BVJ7 150 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 OR51V1Q9H2C8 321 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms