RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 FAM174AQ8TBP5 190 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 SPRYD4Q8WW59 207 aaPredicted RBP12.83□□□□□ -0.36
TRIM4-201ENST00000349062 OSTF1Q92882 214 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 DACT3Q96B18 629 aaPredicted RBP12.83□□□□□ -0.36
TRIM4-201ENST00000349062 ZMYND19Q96E35 227 aaPredicted RBP12.83□□□□□ -0.36
TRIM4-201ENST00000349062 LYRM4Q9HD34 91 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 Q9N2J8 555 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 TNFRSF10DQ9UBN6 386 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 RNF215Q9Y6U7 377 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 CDHR4A6H8M9 788 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 METTL12A8MUP2 240 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 J3QLW9 94 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 PRODHO43272 600 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 AKR7A2O43488 359 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 IL7P13232 177 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 ZNF19P17023 458 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 CENPAP49450 140 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 SNRPGP62308 76 aaKnown RBP12.82□□□□□ -0.36
TRIM4-201ENST00000349062 GALK2Q01415 458 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 SMAD4Q13485 552 aaKnown RBP12.82□□□□□ -0.36
TRIM4-201ENST00000349062 LYPD4Q6UWN0 246 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 PHC2Q8IXK0 858 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 C9orf43Q8TAL5 461 aaPredicted RBP12.82□□□□□ -0.36
TRIM4-201ENST00000349062 HLA-CQ95604 372 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 ERMAPQ96PL5 475 aaPredicted RBP12.82□□□□□ -0.36
TRIM4-201ENST00000349062 ZNF350Q9GZX5 532 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 THADAQ6YHU6 1953 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 SPTBN2O15020 2390 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 SOX1O00570 391 aaPredicted RBP12.82□□□□□ -0.36
TRIM4-201ENST00000349062 CRYZL1O95825 349 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 ATP1B1P05026 303 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 UGT2B10P36537 528 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 EEF1A1P68104 462 aaKnown RBP12.82□□□□□ -0.36
TRIM4-201ENST00000349062 CDK5Q00535 292 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 ZNF620Q6ZNG0 422 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 NOXA1Q86UR1 476 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 SIRT6Q8N6T7 355 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 OR52E2Q8NGJ4 325 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 DCLRE1CQ96SD1 692 aaKnown RBP12.82□□□□□ -0.36
TRIM4-201ENST00000349062 SDHCQ99643 169 aaPredicted RBP12.82□□□□□ -0.36
TRIM4-201ENST00000349062 OR10A5Q9H207 317 aa12.82□□□□□ -0.36
TRIM4-201ENST00000349062 CNOT2Q9NZN8 540 aaKnown RBP12.82□□□□□ -0.36
TRIM4-201ENST00000349062 SYT5O00445 386 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 AGR2O95994 175 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 YES1P07947 543 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 SLC35E2P0CK97 266 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 MYL9P24844 172 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 HNRNPKP61978 463 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRIM4-201ENST00000349062 SCN1BQ07699 218 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 CRMP1Q14194 572 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 NSDHLQ15738 373 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 TIMM50Q3ZCQ8 353 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 NANOGP1Q8N7R0 232 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 TMEM99Q8N816 258 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 OR5H6Q8NGV6 325 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 OR4C6Q8NH72 309 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 SENP5Q96HI0 755 aaPredicted RBP12.81□□□□□ -0.36
TRIM4-201ENST00000349062 NUDT22Q9BRQ3 303 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 TAPBPLQ9BX59 468 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 CDCA4Q9BXL8 241 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 SLC2A4RGQ9NR83 387 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 MKL2Q9ULH7 1088 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 HSPB11Q9Y547 144 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 SNTNA6NMZ2 147 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 PLOD3O60568 738 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 MGAT2Q10469 447 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 FAM27D1Q5T7N8 215 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 PRPF38BQ5VTL8 546 aaKnown RBP12.81□□□□□ -0.36
TRIM4-201ENST00000349062 HEPHL1Q6MZM0 1159 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 NPSR1Q6W5P4 371 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 RASSF6Q6ZTQ3 369 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 MARCH9Q86YJ5 346 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 SDR16C5Q8N3Y7 309 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 FAM26EQ8N5C1 309 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 ZNF563Q8TA94 476 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 SNX18Q96RF0 628 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 KLHDC3Q9BQ90 382 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 FUZQ9BT04 418 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 MEPEQ9NQ76 525 aaPredicted RBP12.81□□□□□ -0.36
TRIM4-201ENST00000349062 FKBP14Q9NWM8 211 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 GRIP1Q9Y3R0 1128 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 DAPL1A0PJW8 107 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 CHURC1-FNTBB4DL54 471 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 RGS13O14921 159 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 ALX3O95076 343 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 FNTBP49356 437 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 ODF4Q2M2E3 257 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 KLHL22Q53GT1 634 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 WDR45BQ5MNZ6 344 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 CBLN3Q6UW01 205 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 KIRREL2Q6UWL6 708 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 MED25Q71SY5 747 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 ATCAYQ86WG3 371 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 HS6ST2Q96MM7 605 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 ELF4Q99607 663 aaPredicted RBP12.81□□□□□ -0.36
TRIM4-201ENST00000349062 ORAI3Q9BRQ5 295 aa12.81□□□□□ -0.36
TRIM4-201ENST00000349062 FAM25AB3EWG3 89 aa12.8□□□□□ -0.36
TRIM4-201ENST00000349062 FAM25CB3EWG5 89 aa12.8□□□□□ -0.36
TRIM4-201ENST00000349062 FAM25GB3EWG6 89 aa12.8□□□□□ -0.36
TRIM4-201ENST00000349062 H7C1C5 153 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms