RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 ESCO2Q56NI9 601 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 ZNF542PQ5EBM4 170 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 SERPINA12Q8IW75 414 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 ZNF615Q8N8J6 731 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 OR5M3Q8NGP4 307 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 MR1Q95460 341 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 NOX3Q9HBY0 568 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 PLCL2Q9UPR0 1127 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 YARS2Q9Y2Z4 477 aaKnown RBP13.74□□□□□ -0.21
NUP50-201ENST00000347635 CD63P08962 238 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 TMEM156Q8N614 296 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 OR4M1Q8NGD0 313 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 MYADMQ96S97 322 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 TMEM43Q9BTV4 400 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 PRR14Q9BWN1 585 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 NOX1Q9Y5S8 564 aa13.74□□□□□ -0.21
NUP50-201ENST00000347635 PHYHO14832 338 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 LGI1O95970 557 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 SNRPBP14678 240 aaKnown RBP13.73□□□□□ -0.21
NUP50-201ENST00000347635 PRPS1P60891 318 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 EIF4EBP2Q13542 120 aaPredicted RBP13.73□□□□□ -0.21
NUP50-201ENST00000347635 ARFRP1Q13795 201 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 NR0B2Q15466 257 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 TCTN3Q6NUS6 607 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 ZNF322Q6U7Q0 402 aaPredicted RBP13.73□□□□□ -0.21
NUP50-201ENST00000347635 GDF7Q7Z4P5 450 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 OR13C2Q8NGS9 318 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 ABHD4Q8TB40 342 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 INSM2Q96T92 566 aaPredicted RBP13.73□□□□□ -0.21
NUP50-201ENST00000347635 RCE1Q9Y256 329 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 ZNFX1Q9P2E3 1918 aaKnown RBP13.73□□□□□ -0.21
NUP50-201ENST00000347635 SLC9B1P1A6NJY1 282 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 H7C2Y5 167 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 TCRBP04435 133 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 PGAM2P15259 253 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 PTH2RP49190 550 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 BTG1P62324 171 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 PDSS1Q5T2R2 415 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 TIGD3Q6B0B8 471 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 C3P1Q6ZMU1 363 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 OR2L8Q8NGY9 312 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 OR5J2Q8NH18 312 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 PTCHD1Q96NR3 888 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 KATNB1Q9BVA0 655 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 ISYNA1Q9NPH2 558 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 SEMA4GQ9NTN9 838 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 SLC39A1Q9NY26 324 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 ACTR10Q9NZ32 417 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 FBXL3Q9UKT7 428 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 NAALAD2Q9Y3Q0 740 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 CCL27Q9Y4X3 112 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 RLN2P04090 185 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 INHBBP09529 407 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 F3P13726 295 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 LILRA6Q6PI73 481 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 TMEM205Q6UW68 189 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 UBALD2Q8IYN6 164 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 OR2T4Q8NH00 348 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 PDE4DIPQ5VU43 2346 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 BLACEA4D250 179 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 ICMTO60725 284 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 PEX14O75381 377 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 UBL3O95164 117 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 HSD11B1P28845 292 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 ACTBP60709 375 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 ACTG1P63261 375 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 IHHQ14623 411 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 OR2L3Q8NG85 312 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 GOT1L1Q8NHS2 421 aaPredicted RBP13.73□□□□□ -0.21
NUP50-201ENST00000347635 EID2BQ96D98 161 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 SGPP1Q9BX95 441 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 SYNPO2LQ9H987 977 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 SLC52A3Q9NQ40 469 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 TESQ9UGI8 421 aaKnown RBP13.73□□□□□ -0.21
NUP50-201ENST00000347635 V9GY05 133 aa13.73□□□□□ -0.21
NUP50-201ENST00000347635 WDR90Q96KV7 1748 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 TEX51A0A1B0GUA7 166 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 SERTM1A2A2V5 107 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 FAM171A2A8MVW0 826 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 TP53I11O14683 189 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 PIP5K1CO60331 668 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 ZNF780AO75290 641 aaPredicted RBP13.72□□□□□ -0.21
NUP50-201ENST00000347635 CSF1P09603 554 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 UGT2B7P16662 529 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 OPRD1P41143 372 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 LIM2P55344 173 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 MFSD9Q8NBP5 474 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 OR2A14Q96R47 310 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 MED18Q9BUE0 208 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 ZNF436Q9C0F3 470 aaPredicted RBP13.72□□□□□ -0.21
NUP50-201ENST00000347635 METTL17Q9H7H0 456 aaPredicted RBP13.72□□□□□ -0.21
NUP50-201ENST00000347635 MUTYHQ9UIF7 546 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 EIF1AYO14602 144 aaKnown RBP13.72□□□□□ -0.21
NUP50-201ENST00000347635 AHSA1O95433 338 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 SRFP11831 508 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 ETV6P41212 452 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 RAE1P78406 368 aaKnown RBP13.72□□□□□ -0.21
NUP50-201ENST00000347635 OC90Q02509 493 aaPredicted RBP13.72□□□□□ -0.21
NUP50-201ENST00000347635 CCDC58Q4VC31 144 aa13.72□□□□□ -0.21
NUP50-201ENST00000347635 MRPL2Q5T653 305 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms