RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 YRDCQ86U90 279 aaKnown RBP16.92■□□□□ 0.3
CDHR4-201ENST00000343366 DNAJA4Q8WW22 397 aaPredicted RBP16.92■□□□□ 0.3
CDHR4-201ENST00000343366 C12orf10Q9HB07 376 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 TMEM27Q9HBJ8 222 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 SELENONQ9NZV5 590 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 RPS6KB2Q9UBS0 482 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 OSGIN2Q9Y236 505 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 PCNX3Q9H6A9 2034 aa16.92■□□□□ 0.3
CDHR4-201ENST00000343366 PCNX1Q96RV3 2341 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 B4DXG7 233 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 TPST1O60507 370 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 HOXD4P09016 255 aaPredicted RBP16.91■□□□□ 0.3
CDHR4-201ENST00000343366 PEPDP12955 493 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 IDH2P48735 452 aaKnown RBP16.91■□□□□ 0.3
CDHR4-201ENST00000343366 CRYBA2P53672 197 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 SESN3P58005 492 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 TESK1Q15569 626 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 NDUFAF6Q330K2 333 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 VASNQ6EMK4 673 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 LCN8Q6JVE9 175 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 FKBP9P1Q75LS8 142 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 FAM156AQ8NDB6 213 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 SLC25A43Q8WUT9 341 aaPredicted RBP16.91■□□□□ 0.3
CDHR4-201ENST00000343366 GEMIN6Q8WXD5 167 aaKnown RBP16.91■□□□□ 0.3
CDHR4-201ENST00000343366 ABTB1Q969K4 478 aaPredicted RBP16.91■□□□□ 0.3
CDHR4-201ENST00000343366 TPD52L3Q96J77 140 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 LRGUKQ96M69 825 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 CADM1Q9BY67 442 aaKnown RBP16.91■□□□□ 0.3
CDHR4-201ENST00000343366 PCDHAC1Q9H158 963 aa16.91■□□□□ 0.3
CDHR4-201ENST00000343366 NIPBLQ6KC79 2804 aaeCLIP16.9■□□□□ 0.3
CDHR4-201ENST00000343366 OR2M5A3KFT3 312 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 C17orf51A8MQB3 221 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 PRSS44E7EML9 344 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 OIP5O43482 229 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 GMFGO60234 142 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 NTN1O95631 604 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 ZNF682O95780 498 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 CELA3AP09093 270 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 GKN3PP0CG01 181 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 NCK1P16333 377 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 PTGS2P35354 604 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 CLK1P49759 484 aaKnown RBP16.9■□□□□ 0.3
CDHR4-201ENST00000343366 RNF144AP50876 292 aaPredicted RBP16.9■□□□□ 0.3
CDHR4-201ENST00000343366 POLR2HP52434 150 aaKnown RBP16.9■□□□□ 0.3
CDHR4-201ENST00000343366 CASP6P55212 293 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 RAC1P63000 192 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 PLAURQ03405 335 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 SELENBP1Q13228 472 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 IFI44LQ53G44 452 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 SWT1Q5T5J6 900 aaKnown RBP16.9■□□□□ 0.3
CDHR4-201ENST00000343366 WLSQ5T9L3 541 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 ASRGL1Q7L266 308 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 ULK2Q8IYT8 1036 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 GPR32P1Q8NGA4 272 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 RELTQ969Z4 430 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 LURAP1Q96LR2 239 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 TSPAN10Q9H1Z9 355 aaPredicted RBP16.9■□□□□ 0.3
CDHR4-201ENST00000343366 SLC6A15Q9H2J7 730 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 PAQR5Q9NXK6 330 aaPredicted RBP16.9■□□□□ 0.3
CDHR4-201ENST00000343366 PACSIN3Q9UKS6 424 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 RPH3AQ9Y2J0 694 aaPredicted RBP16.9■□□□□ 0.3
CDHR4-201ENST00000343366 SH3GLB1Q9Y371 365 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 HRH3Q9Y5N1 445 aa16.9■□□□□ 0.3
CDHR4-201ENST00000343366 KLF2Q9Y5W3 355 aaPredicted RBP16.9■□□□□ 0.3
CDHR4-201ENST00000343366 NCOA6Q14686 2063 aaPredicted RBP16.9■□□□□ 0.3
CDHR4-201ENST00000343366 DNHD1Q96M86 4753 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 A0A1B0GTH9 108 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 PRRG2O14669 202 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 BCAS1O75363 584 aaPredicted RBP16.89■□□□□ 0.29
CDHR4-201ENST00000343366 PDE5AO76074 875 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 EPPINO95925 133 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 IFNW1P05000 195 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 PNMTP11086 282 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 GABRA1P14867 456 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 CPN1P15169 458 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 ABOP16442 354 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 ITGA2P17301 1181 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 PTGER4P35408 488 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 ZNF136P52737 540 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 B3GALT5-AS1P59052 145 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 GLIPR1L2Q4G1C9 344 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 PDSS1Q5T2R2 415 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 C3orf33Q6P1S2 294 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 ZNF613Q6PF04 617 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 ULK3Q6PHR2 472 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 PYURFQ96I23 114 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 UGT2B28Q9BY64 529 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 ADAM19Q9H013 955 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 GMPR2Q9P2T1 348 aaKnown RBP16.89■□□□□ 0.29
CDHR4-201ENST00000343366 ACAD8Q9UKU7 415 aa16.89■□□□□ 0.29
CDHR4-201ENST00000343366 AQP12BA6NM10 295 aa16.88■□□□□ 0.29
CDHR4-201ENST00000343366 AHRRA9YTQ3 701 aa16.88■□□□□ 0.29
CDHR4-201ENST00000343366 UMPSP11172 480 aa16.88■□□□□ 0.29
CDHR4-201ENST00000343366 BMP7P18075 431 aa16.88■□□□□ 0.29
CDHR4-201ENST00000343366 PSMA4P25789 261 aaKnown RBP16.88■□□□□ 0.29
CDHR4-201ENST00000343366 CRYZQ08257 329 aaKnown RBP16.88■□□□□ 0.29
CDHR4-201ENST00000343366 MERTKQ12866 999 aa16.88■□□□□ 0.29
CDHR4-201ENST00000343366 FOXF1Q12946 379 aa16.88■□□□□ 0.29
CDHR4-201ENST00000343366 TOMM34Q15785 309 aaPredicted RBP16.88■□□□□ 0.29
CDHR4-201ENST00000343366 C5orf46Q6UWT4 87 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms