RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 IL9P15248 144 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 CRMP1Q14194 572 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 SEZ6L2Q6UXD5 910 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 C17orf64Q86WR6 236 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 OR5M9Q8NGP3 310 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 NKX3-1Q99801 234 aaPredicted RBP13.77□□□□□ -0.21
CLCN1-201ENST00000343257 GAL3ST1Q99999 423 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 C6orf106Q9H6K1 298 aaPredicted RBP13.77□□□□□ -0.21
CLCN1-201ENST00000343257 NOX4Q9NPH5 578 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 ENTPD4Q9Y227 616 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 Q9Y3F1 56 aa13.77□□□□□ -0.21
CLCN1-201ENST00000343257 NPIPA5A0A0B4J1W7 369 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 CENPVL1A0A0U1RR11 272 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 NPIPA7E9PJI5 369 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 LCMT2O60294 686 aaKnown RBP13.76□□□□□ -0.21
CLCN1-201ENST00000343257 NPIPA8P0DM63 369 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 GAAP10253 952 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 MC3RP41968 323 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 ANXA11P50995 505 aaKnown RBP13.76□□□□□ -0.21
CLCN1-201ENST00000343257 TAF1CQ15572 869 aaPredicted RBP13.76□□□□□ -0.21
CLCN1-201ENST00000343257 LTB4RQ15722 352 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 TMEM69Q5SWH9 247 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 HAGHLQ6PII5 290 aaPredicted RBP13.76□□□□□ -0.21
CLCN1-201ENST00000343257 OR6V1Q8N148 313 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 OR8S1Q8NH09 359 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 KISS1RQ969F8 398 aaPredicted RBP13.76□□□□□ -0.21
CLCN1-201ENST00000343257 PPP1R16AQ96I34 528 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 OR7D2Q96RA2 312 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 C7orf50Q9BRJ6 194 aaKnown RBP13.76□□□□□ -0.21
CLCN1-201ENST00000343257 MS4A8Q9BY19 250 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 SLC38A1Q9H2H9 487 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 KLHL31Q9H511 634 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 OPN4Q9UHM6 478 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 ZNF230Q9UIE0 474 aaPredicted RBP13.76□□□□□ -0.21
CLCN1-201ENST00000343257 GNG8Q9UK08 70 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 DNAH14Q0VDD8 3507 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 ARID1BQ8NFD5 2236 aaPredicted RBP13.76□□□□□ -0.21
CLCN1-201ENST00000343257 UNC119BA6NIH7 251 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 DISC1C4P0D8 188 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 SIGLEC6O43699 453 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 HPP00738 406 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 EDNRAP25101 427 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 PDX1P52945 283 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 FXYD6P3P58550 94 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 PRR5P85299 388 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 STX4Q12846 297 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 MAPK14Q16539 360 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 FAM69AQ5T7M9 428 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 HENMT1Q5T8I9 393 aaKnown RBP13.76□□□□□ -0.21
CLCN1-201ENST00000343257 NUDT13Q86X67 352 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 GID4Q8IVV7 300 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 FAM71CQ8NEG0 241 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 DNAAF1Q8NEP3 725 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 SYNPRQ8TBG9 265 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 BRIX1Q8TDN6 353 aaKnown RBP13.76□□□□□ -0.21
CLCN1-201ENST00000343257 CAMK1GQ96NX5 476 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 TSNAXQ99598 290 aaKnown RBP13.76□□□□□ -0.21
CLCN1-201ENST00000343257 CMSS1Q9BQ75 279 aaKnown RBP13.76□□□□□ -0.21
CLCN1-201ENST00000343257 FN3KQ9H479 309 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 TMEM185BQ9H7F4 350 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 ABRACLQ9P1F3 81 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 USP36Q9P275 1121 aaKnown RBP13.76□□□□□ -0.21
CLCN1-201ENST00000343257 LSM7Q9UK45 103 aaKnown RBP13.76□□□□□ -0.21
CLCN1-201ENST00000343257 NPFFR2Q9Y5X5 522 aa13.76□□□□□ -0.21
CLCN1-201ENST00000343257 TRBV2A0A0J9YWF9 115 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 UBE2QL1A1L167 161 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 CARNS1A5YM72 827 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 NDUFS4O43181 175 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 CDC123O75794 336 aaPredicted RBP13.75□□□□□ -0.21
CLCN1-201ENST00000343257 SBK2P0C263 348 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 ELFN1P0C7U0 828 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 NTSP30990 170 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 KCNJ3P48549 501 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 METAP1P53582 386 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 TAS2R38P59533 333 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 POLR2LP62875 67 aaKnown RBP13.75□□□□□ -0.21
CLCN1-201ENST00000343257 MAT1AQ00266 395 aaKnown RBP13.75□□□□□ -0.21
CLCN1-201ENST00000343257 TNFRSF17Q02223 184 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 ZNF626Q68DY1 528 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 PXKQ7Z7A4 578 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 TRAM1L1Q8N609 369 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 OR4D10Q8NGI6 311 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 UBE2E3Q969T4 207 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 KLHL28Q9NXS3 571 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 TAS2R5Q9NYW4 299 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 EDARQ9UNE0 448 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 SLC6A5Q9Y345 797 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 NEDD8-MDP1E9PL57 170 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 F5H5P2 479 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 F8W036 122 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 GNB5O14775 395 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 POP7O75817 140 aaKnown RBP13.75□□□□□ -0.21
CLCN1-201ENST00000343257 PPP1R3DO95685 299 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 CBR1P16152 277 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 PLA2G7Q13093 441 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 TMEM44Q2T9K0 475 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 MBOAT2Q6ZWT7 520 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 OR9A2Q8NGT5 310 aa13.75□□□□□ -0.21
CLCN1-201ENST00000343257 OR2A12Q8NGT7 310 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms