RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 LYARQ9NX58 379 aaKnown RBP20.71■□□□□ 0.91
TRIM28-202ENST00000341753 WSB2Q9NYS7 404 aaPredicted RBP20.71■□□□□ 0.91
TRIM28-202ENST00000341753 FKBP7Q9Y680 259 aa20.71■□□□□ 0.91
TRIM28-202ENST00000341753 RNF215Q9Y6U7 377 aa20.71■□□□□ 0.91
TRIM28-202ENST00000341753 ARPC1BO15143 372 aaKnown RBP20.7■□□□□ 0.9
TRIM28-202ENST00000341753 F3P13726 295 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 GAB4Q2WGN9 574 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 SLC44A3Q8N4M1 653 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 OTUB2Q96DC9 234 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 LRIG1Q96JA1 1093 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 MGAT4CQ9UBM8 478 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 POMT2Q9UKY4 750 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 MYO9BQ13459 2157 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 ADH1CP00326 375 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 SAGP10523 405 aaPredicted RBP20.7■□□□□ 0.9
TRIM28-202ENST00000341753 UGT2B7P16662 529 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 HTR2AP28223 471 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 MPIP34949 423 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 ARHGAP19Q14CB8 494 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 HNRNPA1L2Q32P51 320 aaKnown RBP20.7■□□□□ 0.9
TRIM28-202ENST00000341753 FAAH2Q6GMR7 532 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 SLC48A1Q6P1K1 146 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 OR4N5Q8IXE1 308 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 ETFBKMTQ8IXQ9 262 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 CMTM4Q8IZR5 234 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 BRIX1Q8TDN6 353 aaKnown RBP20.7■□□□□ 0.9
TRIM28-202ENST00000341753 NR4A3Q92570 626 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 GIMAP5Q96F15 307 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 WBP1Q96G27 269 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 OR14A2Q96R54 314 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 SDHAF2Q9NX18 166 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 WDR45Q9Y484 360 aa20.7■□□□□ 0.9
TRIM28-202ENST00000341753 hCG_1807616A0A1W2PRN6 198 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 LGALS8O00214 317 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 KHNYNO15037 678 aaKnown RBP20.69■□□□□ 0.9
TRIM28-202ENST00000341753 FLRT2O43155 660 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 VEGFDO43915 354 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 SLC35G4P0C7Q5 338 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 ZNF136P52737 540 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 SNRPNP63162 240 aaKnown RBP20.69■□□□□ 0.9
TRIM28-202ENST00000341753 ZMYND11Q15326 602 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 TUSC1Q2TAM9 212 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 HES5Q5TA89 166 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 ABHD17CQ6PCB6 329 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 OR7G2Q8NG99 324 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 OR2A1Q8NGT9 310 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 MOSPD2Q8NHP6 518 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 OR8D1Q8WZ84 308 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 KLHL15Q96M94 604 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 PPA2Q9H2U2 334 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 CLDND1Q9NY35 253 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 CES1P1Q9UKY3 287 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 KCNMB2Q9Y691 235 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 MAGEB1P43366 347 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 MAPK14Q16539 360 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 GARNL3Q5VVW2 1013 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 SLC22A10Q63ZE4 541 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 DMKNQ6E0U4 476 aaPredicted RBP20.69■□□□□ 0.9
TRIM28-202ENST00000341753 ACTRT3Q9BYD9 372 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 HRASLSQ9HDD0 168 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 DEC1Q9P2X7 70 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 PPP1R3DO95685 299 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 CCR9P51686 369 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 CLDN12P56749 244 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 PRDX1Q06830 199 aaKnown RBP20.69■□□□□ 0.9
TRIM28-202ENST00000341753 PRAMEF8Q5VWM4 474 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 PRAMEF7Q5VXH5 474 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 OR52I2Q8NH67 350 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 LHFPL5Q8TAF8 219 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 SMIM4Q8WVI0 70 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 PCBD2Q9H0N5 130 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 USP36Q9P275 1121 aaKnown RBP20.69■□□□□ 0.9
TRIM28-202ENST00000341753 KLK11Q9UBX7 282 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 ZNF69Q9UC07 566 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 CAMK2AQ9UQM7 478 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 NPTNQ9Y639 398 aa20.69■□□□□ 0.9
TRIM28-202ENST00000341753 FAM86C2PA6NEL3 165 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 SLC22A31A6NKX4 558 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 SERPINI2O75830 405 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 NRG3P56975 720 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 MLF2Q15773 248 aaPredicted RBP20.68■□□□□ 0.9
TRIM28-202ENST00000341753 COQ8AQ8NI60 647 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 PDCD1LG2Q9BQ51 273 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 SLC25A18Q9H1K4 315 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 CALML5Q9NZT1 146 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 NPFFR2Q9Y5X5 522 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 MID1O15344 667 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 NARSO43776 548 aaKnown RBP20.68■□□□□ 0.9
TRIM28-202ENST00000341753 KIAA1024LP59773 190 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 METRNLQ641Q3 311 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 ARSKQ6UWY0 536 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 ALKAL2Q6UX46 152 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 C3P1Q6ZMU1 363 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 LNX2Q8N448 690 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 TMEM239Q8WW34 195 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 ZMYND19Q96E35 227 aaPredicted RBP20.68■□□□□ 0.9
TRIM28-202ENST00000341753 SARGQ9BW04 601 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 REG4Q9BYZ8 158 aa20.68■□□□□ 0.9
TRIM28-202ENST00000341753 ST6GALNAC2Q9UJ37 374 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms