RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 PPP1CAP62136 330 aa13.65□□□□□ -0.22
RET-201ENST00000340058 ACY1Q03154 408 aa13.65□□□□□ -0.22
RET-201ENST00000340058 RAB40BQ12829 278 aa13.65□□□□□ -0.22
RET-201ENST00000340058 QSOX2Q6ZRP7 698 aa13.65□□□□□ -0.22
RET-201ENST00000340058 LSM14AQ8ND56 463 aaKnown RBP13.65□□□□□ -0.22
RET-201ENST00000340058 OR5L2Q8NGL0 311 aa13.65□□□□□ -0.22
RET-201ENST00000340058 OR6Q1Q8NGQ2 317 aa13.65□□□□□ -0.22
RET-201ENST00000340058 FAM46BQ96A09 425 aa13.65□□□□□ -0.22
RET-201ENST00000340058 FOLH1BQ9HBA9 442 aa13.65□□□□□ -0.22
RET-201ENST00000340058 MEN1O00255 615 aa13.64□□□□□ -0.23
RET-201ENST00000340058 FAM83FQ8NEG4 500 aaPredicted RBP13.64□□□□□ -0.23
RET-201ENST00000340058 BEST4Q8NFU0 473 aa13.64□□□□□ -0.23
RET-201ENST00000340058 TSLPQ969D9 159 aa13.64□□□□□ -0.23
RET-201ENST00000340058 TCTN2Q96GX1 697 aa13.64□□□□□ -0.23
RET-201ENST00000340058 HIST1H2AAQ96QV6 131 aa13.64□□□□□ -0.23
RET-201ENST00000340058 HHATLQ9HCP6 504 aa13.64□□□□□ -0.23
RET-201ENST00000340058 A4GALTQ9NPC4 353 aa13.64□□□□□ -0.23
RET-201ENST00000340058 BABAM2Q9NXR7 383 aa13.64□□□□□ -0.23
RET-201ENST00000340058 POU2F3Q9UKI9 436 aa13.64□□□□□ -0.23
RET-201ENST00000340058 NOP16Q9Y3C1 178 aaKnown RBP13.64□□□□□ -0.23
RET-201ENST00000340058 GREB1LQ9C091 1923 aaPredicted RBP13.64□□□□□ -0.23
RET-201ENST00000340058 TRAV18A0A075B6X5 111 aa13.64□□□□□ -0.23
RET-201ENST00000340058 METTL21EPA6NDL7 271 aa13.64□□□□□ -0.23
RET-201ENST00000340058 UPK1AO00322 258 aa13.64□□□□□ -0.23
RET-201ENST00000340058 CELA2BP08218 269 aaPredicted RBP13.64□□□□□ -0.23
RET-201ENST00000340058 GSTT2BP0CG30 244 aa13.64□□□□□ -0.23
RET-201ENST00000340058 RIDAP52758 137 aaKnown RBP13.64□□□□□ -0.23
RET-201ENST00000340058 GP2P55259 537 aaKnown RBP13.64□□□□□ -0.23
RET-201ENST00000340058 RAE1P78406 368 aaKnown RBP13.64□□□□□ -0.23
RET-201ENST00000340058 BCL2L15Q5TBC7 163 aa13.64□□□□□ -0.23
RET-201ENST00000340058 TMEM92Q6UXU6 159 aa13.64□□□□□ -0.23
RET-201ENST00000340058 MS4A15Q8N5U1 240 aa13.64□□□□□ -0.23
RET-201ENST00000340058 PARP16Q8N5Y8 322 aa13.64□□□□□ -0.23
RET-201ENST00000340058 Q96M85 177 aa13.64□□□□□ -0.23
RET-201ENST00000340058 CRISPLD2Q9H0B8 497 aa13.64□□□□□ -0.23
RET-201ENST00000340058 SEMA6CQ9H3T2 930 aa13.64□□□□□ -0.23
RET-201ENST00000340058 UBE2ZQ9H832 354 aaPredicted RBP13.64□□□□□ -0.23
RET-201ENST00000340058 SATB2Q9UPW6 733 aa13.64□□□□□ -0.23
RET-201ENST00000340058 ZNF831Q5JPB2 1677 aa13.64□□□□□ -0.23
RET-201ENST00000340058 ANKRD61A6NGH8 418 aa13.64□□□□□ -0.23
RET-201ENST00000340058 SCRG1O75711 98 aa13.64□□□□□ -0.23
RET-201ENST00000340058 ZNF43P17038 809 aa13.64□□□□□ -0.23
RET-201ENST00000340058 SLC1A3P43003 542 aa13.64□□□□□ -0.23
RET-201ENST00000340058 TGM4P49221 684 aa13.64□□□□□ -0.23
RET-201ENST00000340058 POU3F4P49335 361 aa13.64□□□□□ -0.23
RET-201ENST00000340058 ZNF322Q6U7Q0 402 aaPredicted RBP13.64□□□□□ -0.23
RET-201ENST00000340058 SLITRK4Q8IW52 837 aa13.64□□□□□ -0.23
RET-201ENST00000340058 ASB15Q8WXK1 588 aa13.64□□□□□ -0.23
RET-201ENST00000340058 OR10A4Q9H209 315 aa13.64□□□□□ -0.23
RET-201ENST00000340058 SLAMF7Q9NQ25 335 aa13.64□□□□□ -0.23
RET-201ENST00000340058 PISDQ9UG56 409 aa13.64□□□□□ -0.23
RET-201ENST00000340058 UTRNP46939 3433 aa13.64□□□□□ -0.23
RET-201ENST00000340058 F5H5K5 113 aa13.63□□□□□ -0.23
RET-201ENST00000340058 CD1CP29017 333 aa13.63□□□□□ -0.23
RET-201ENST00000340058 SHC1P29353 583 aa13.63□□□□□ -0.23
RET-201ENST00000340058 POU3F1Q03052 451 aaPredicted RBP13.63□□□□□ -0.23
RET-201ENST00000340058 PRSS36Q5K4E3 855 aa13.63□□□□□ -0.23
RET-201ENST00000340058 MEPCEQ7L2J0 689 aaKnown RBP13.63□□□□□ -0.23
RET-201ENST00000340058 P4HA3Q7Z4N8 544 aa13.63□□□□□ -0.23
RET-201ENST00000340058 ETFBKMTQ8IXQ9 262 aa13.63□□□□□ -0.23
RET-201ENST00000340058 ZNF224Q9NZL3 707 aa13.63□□□□□ -0.23
RET-201ENST00000340058 CNOT2Q9NZN8 540 aaKnown RBP13.63□□□□□ -0.23
RET-201ENST00000340058 SLC35A3Q9Y2D2 325 aa13.63□□□□□ -0.23
RET-201ENST00000340058 ADAM18Q9Y3Q7 739 aa13.63□□□□□ -0.23
RET-201ENST00000340058 TMEM14AQ9Y6G1 99 aa13.63□□□□□ -0.23
RET-201ENST00000340058 POLEQ07864 2286 aa13.63□□□□□ -0.23
RET-201ENST00000340058 AP1G1O43747 822 aa13.63□□□□□ -0.23
RET-201ENST00000340058 ACP2P11117 423 aa13.63□□□□□ -0.23
RET-201ENST00000340058 APEX1P27695 318 aaKnown RBP13.63□□□□□ -0.23
RET-201ENST00000340058 AFF3P51826 1226 aaKnown RBP13.63□□□□□ -0.23
RET-201ENST00000340058 MAB21L1Q13394 359 aa13.63□□□□□ -0.23
RET-201ENST00000340058 SAXO2Q658L1 398 aa13.63□□□□□ -0.23
RET-201ENST00000340058 DPY19L4Q7Z388 723 aa13.63□□□□□ -0.23
RET-201ENST00000340058 LACC1Q8IV20 430 aa13.63□□□□□ -0.23
RET-201ENST00000340058 PNLDC1Q8NA58 520 aaKnown RBP13.63□□□□□ -0.23
RET-201ENST00000340058 OR14L1PQ8NHC6 308 aa13.63□□□□□ -0.23
RET-201ENST00000340058 RASD2Q96D21 266 aa13.63□□□□□ -0.23
RET-201ENST00000340058 TEX101Q9BY14 249 aa13.63□□□□□ -0.23
RET-201ENST00000340058 DOCK6Q96HP0 2047 aa13.63□□□□□ -0.23
RET-201ENST00000340058 NRG2O14511 850 aaPredicted RBP13.63□□□□□ -0.23
RET-201ENST00000340058 ZNF264O43296 627 aa13.63□□□□□ -0.23
RET-201ENST00000340058 ZNF749O43361 778 aa13.63□□□□□ -0.23
RET-201ENST00000340058 CTSVO60911 334 aa13.63□□□□□ -0.23
RET-201ENST00000340058 RBBP9O75884 186 aa13.63□□□□□ -0.23
RET-201ENST00000340058 MAPK3P27361 379 aaPredicted RBP13.63□□□□□ -0.23
RET-201ENST00000340058 SLC6A19Q695T7 634 aa13.63□□□□□ -0.23
RET-201ENST00000340058 VASNQ6EMK4 673 aa13.63□□□□□ -0.23
RET-201ENST00000340058 ZNF836Q6ZNA1 936 aa13.63□□□□□ -0.23
RET-201ENST00000340058 PPP1R3BQ86XI6 285 aa13.63□□□□□ -0.23
RET-201ENST00000340058 ZNF440Q8IYI8 595 aa13.63□□□□□ -0.23
RET-201ENST00000340058 GALNT6Q8NCL4 622 aa13.63□□□□□ -0.23
RET-201ENST00000340058 CHST8Q9H2A9 424 aa13.63□□□□□ -0.23
RET-201ENST00000340058 TRPV4Q9HBA0 871 aa13.63□□□□□ -0.23
RET-201ENST00000340058 ZNF81P51508 661 aa13.62□□□□□ -0.23
RET-201ENST00000340058 P2RY14Q15391 338 aa13.62□□□□□ -0.23
RET-201ENST00000340058 ZNF181Q2M3W8 571 aa13.62□□□□□ -0.23
RET-201ENST00000340058 C9orf135Q5VTT2 229 aa13.62□□□□□ -0.23
RET-201ENST00000340058 PAPD4Q6PIY7 484 aaKnown RBP13.62□□□□□ -0.23
RET-201ENST00000340058 SLC46A3Q7Z3Q1 461 aa13.62□□□□□ -0.23
RET-201ENST00000340058 SYT9Q86SS6 491 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms