RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 SLC12A9Q9BXP2 914 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 BARHL1Q9BZE3 327 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 LHPPQ9H008 270 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF700Q9H0M5 742 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 THAP2Q9H0W7 228 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ENAMQ9NRM1 1142 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 SEMA4GQ9NTN9 838 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 KPTNQ9Y664 436 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 HEATR5BQ9P2D3 2071 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 OR51F1A6NGY5 319 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 CLDN24A6NM45 220 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 SOX1O00570 391 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 HAND1O96004 215 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 C2P06681 752 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 PTHLHP12272 177 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 IMPA1P29218 277 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ALDH3B1P43353 468 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 RPS15AP62244 130 aaKnown RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 SRYQ05066 204 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 STK11Q15831 433 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 LY6G5CQ5SRR4 150 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 GJB7Q6PEY0 223 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 GRINAQ7Z429 371 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 GDF7Q7Z4P5 450 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 KDF1Q8NAX2 398 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 PROKR2Q8NFJ6 384 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 OR5D14Q8NGL3 314 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 SDSLQ96GA7 329 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 KCNC2Q96PR1 638 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 DOHHQ9BU89 302 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 ABCG5Q9H222 651 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 BARX1Q9HBU1 254 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 B3GNT2Q9NY97 397 aa3.09□□□□□ -1.91
CSMD3-202ENST00000339701 NDRG4Q9ULP0 352 aaKnown RBP3.09□□□□□ -1.91
CSMD3-202ENST00000339701 A0A1W2PQH9 124 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 PHOX2AO14813 284 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 LILRB5O75023 590 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 CDRT1O95170 752 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 ANXA4P09525 319 aaPredicted RBP3.09□□□□□ -1.92
CSMD3-202ENST00000339701 GM2AP17900 193 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 TAS2R45P59539 299 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 ANKRD16Q6P6B7 361 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 KLHDC10Q6PID8 442 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 ERN2Q76MJ5 926 aaKnown RBP3.09□□□□□ -1.92
CSMD3-202ENST00000339701 CAMKMTQ7Z624 323 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 CRYBG2Q8N1P7 616 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 AGAP11Q8TF27 550 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM171Q8WVE6 324 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 ARRDC3Q96B67 414 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 TSGA13Q96PP4 275 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 KCNJ15Q99712 375 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 GINS3Q9BRX5 216 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 DPH7Q9BTV6 452 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 DUSP26Q9BV47 211 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 C11orf16Q9NQ32 467 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 POT1Q9NUX5 634 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.09□□□□□ -1.92
CSMD3-202ENST00000339701 GPATCH2LQ9NWQ4 482 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 STRAPQ9Y3F4 350 aaKnown RBP3.09□□□□□ -1.92
CSMD3-202ENST00000339701 TEX13DA0A0J9YY54 714 aaPredicted RBP3.09□□□□□ -1.92
CSMD3-202ENST00000339701 FAM24AA6NFZ4 105 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 J3QKU1 62 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF185O15231 689 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF207O43670 478 aaKnown RBP3.09□□□□□ -1.92
CSMD3-202ENST00000339701 PPP1R11O60927 126 aaPredicted RBP3.09□□□□□ -1.92
CSMD3-202ENST00000339701 PLA2G5P39877 138 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 SLC5A3P53794 718 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 SAMD13Q5VXD3 122 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 CLEC2AQ6UVW9 174 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 SERPINA11Q86U17 422 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 BPIFB2Q8N4F0 458 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 OR7D4Q8NG98 312 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 CITED4Q96RK1 184 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 DPH2Q9BQC3 489 aaPredicted RBP3.09□□□□□ -1.92
CSMD3-202ENST00000339701 RHNO1Q9BSD3 238 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 CFHR5Q9BXR6 569 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 BPIFA1Q9NP55 256 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 MPDZO75970 2070 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 SERTM1A2A2V5 107 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 KIAA1324LA8MWY0 1029 aaPredicted RBP3.09□□□□□ -1.92
CSMD3-202ENST00000339701 SCAMP3O14828 347 aaKnown RBP3.09□□□□□ -1.92
CSMD3-202ENST00000339701 VILLO15195 856 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 CPNE3O75131 537 aaKnown RBP3.09□□□□□ -1.92
CSMD3-202ENST00000339701 CD36P16671 472 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 NAT1P18440 290 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 CCNOP22674 350 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 CPN2P22792 545 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 VAMP1P23763 118 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 PRSS3P35030 304 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 ERVS71-1P61550 626 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 AQP6Q13520 282 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 SLC51BQ86UW2 128 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 FAM131BQ86XD5 332 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM139Q8IV31 216 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 ADGRF3Q8IZF5 1079 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 NEIL3Q8TAT5 605 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 ACO2Q99798 780 aaKnown RBP3.09□□□□□ -1.92
CSMD3-202ENST00000339701 C1orf198Q9H425 327 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 LTB4R2Q9NPC1 389 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms