RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 SHC2P98077 582 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 ALG10BQ5I7T1 473 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 FAAH2Q6GMR7 532 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 C3P1Q6ZMU1 363 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 FCAMRQ8WWV6 532 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 KIAA1143Q96AT1 154 aaPredicted RBP13.12□□□□□ -0.31
PCDH8-201ENST00000338862 LRIG1Q96JA1 1093 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 NMNAT3Q96T66 252 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 C1QTNF2Q9BXJ5 285 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 OR52A5Q9H2C5 316 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 DPEP2Q9H4A9 486 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 NT5DC2Q9H857 520 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 FGF20Q9NP95 211 aaPredicted RBP13.12□□□□□ -0.31
PCDH8-201ENST00000338862 AP1M2Q9Y6Q5 423 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 TCRBV16S1A1N1A0A5B0 115 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 TRAPPC13A5PLN9 417 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 MAN2B1O00754 1011 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 ITGB8P26012 769 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 SLC6A1P30531 599 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 ELAVL3Q14576 367 aaKnown RBP13.12□□□□□ -0.31
PCDH8-201ENST00000338862 OR5M10Q6IEU7 315 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 ARSKQ6UWY0 536 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 C17orf107Q6ZR85 190 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 FAM220AQ7Z4H9 259 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 OR5T3Q8NGG3 340 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 OR2T4Q8NH00 348 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 C20orf85Q9H1P6 137 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 FKRPQ9H9S5 495 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 GOSR2O14653 212 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 ANKRD34CP0C6C1 535 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 ITPKBP27987 946 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 PXNP49023 591 aaPredicted RBP13.12□□□□□ -0.31
PCDH8-201ENST00000338862 ERV3-1Q14264 604 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 LGALSLQ3ZCW2 172 aaPredicted RBP13.12□□□□□ -0.31
PCDH8-201ENST00000338862 NHLRC1Q6VVB1 395 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 UBE3DQ7Z6J8 389 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 NRROSQ86YC3 692 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 MS4A15Q8N5U1 240 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 DUSP18Q8NEJ0 188 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 SYNPRQ8TBG9 265 aa13.12□□□□□ -0.31
PCDH8-201ENST00000338862 TSACCQ96A04 125 aaPredicted RBP13.12□□□□□ -0.31
PCDH8-201ENST00000338862 S100A16Q96FQ6 103 aaKnown RBP13.12□□□□□ -0.31
PCDH8-201ENST00000338862 TSPAN10Q9H1Z9 355 aaPredicted RBP13.12□□□□□ -0.31
PCDH8-201ENST00000338862 LOC285556D6RIA3 1793 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 ELOA3DA6NLF2 546 aaPredicted RBP13.11□□□□□ -0.31
PCDH8-201ENST00000338862 IMPA2O14732 288 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 CASC3O15234 703 aaKnown RBP13.11□□□□□ -0.31
PCDH8-201ENST00000338862 SELENOFO60613 162 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 ADRB1P08588 477 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 OR8G3PP0DMU2 310 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 FGF9P31371 208 aaPredicted RBP13.11□□□□□ -0.31
PCDH8-201ENST00000338862 DCTDP32321 178 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 PPM1AP35813 382 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 RPL35P42766 123 aaKnown RBP13.11□□□□□ -0.31
PCDH8-201ENST00000338862 PCBP4P57723 403 aaKnown RBP13.11□□□□□ -0.31
PCDH8-201ENST00000338862 HTR4Q13639 388 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 ELOA3BQ3SY89 546 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 ZNF836Q6ZNA1 936 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 Q6ZTK2 550 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 MBOAT2Q6ZWT7 520 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 ELOA3Q8NG57 546 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 RERGQ96A58 199 aaPredicted RBP13.11□□□□□ -0.31
PCDH8-201ENST00000338862 MNTQ99583 582 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 EXO5Q9H790 373 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 MTHFD2LQ9H903 347 aaPredicted RBP13.11□□□□□ -0.31
PCDH8-201ENST00000338862 GPN1Q9HCN4 374 aaPredicted RBP13.11□□□□□ -0.31
PCDH8-201ENST00000338862 CYSLTR2Q9NS75 346 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 ZNF593O00488 134 aaPredicted RBP13.11□□□□□ -0.31
PCDH8-201ENST00000338862 POU3F2P20265 443 aaPredicted RBP13.11□□□□□ -0.31
PCDH8-201ENST00000338862 P2RY2P41231 377 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 VASPP50552 380 aaPredicted RBP13.11□□□□□ -0.31
PCDH8-201ENST00000338862 HTRA3P83110 453 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 MAPK14Q16539 360 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 TMEM44Q2T9K0 475 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 AADACL4Q5VUY2 407 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 SSX6Q7RTT6 188 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 FRMD1Q8N878 549 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 ASB12Q8WXK4 309 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 ING1Q9UK53 422 aaPredicted RBP13.11□□□□□ -0.31
PCDH8-201ENST00000338862 PATJQ8NI35 1801 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 ARRDC5A6NEK1 342 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 GTF2F2P13984 249 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 MNDAP41218 407 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 MTNR1BP49286 362 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 GAS6Q14393 721 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 AANATQ16613 207 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 PCGF3Q3KNV8 242 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 LHX8Q68G74 356 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 NIPAL3Q6P499 406 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 ABHD17CQ6PCB6 329 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 SHISA5Q8N114 240 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 RBPMSQ93062 196 aaKnown RBP13.11□□□□□ -0.31
PCDH8-201ENST00000338862 PEX11GQ96HA9 241 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 OR2M2Q96R28 347 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 SCML1Q9UN30 329 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 ICKQ9UPZ9 632 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 LIPT1Q9Y234 373 aa13.11□□□□□ -0.31
PCDH8-201ENST00000338862 A0A1B0GTH9 108 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 C11orf98E9PRG8 122 aa13.1□□□□□ -0.31
PCDH8-201ENST00000338862 B3GALT2O43825 422 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms