RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 VASH1Q7L8A9 365 aaPredicted RBP16■□□□□ 0.15
DDX28-201ENST00000332395 TMEM99Q8N816 258 aa16■□□□□ 0.15
DDX28-201ENST00000332395 DCLRE1CQ96SD1 692 aaKnown RBP16■□□□□ 0.15
DDX28-201ENST00000332395 COQ7Q99807 217 aa16■□□□□ 0.15
DDX28-201ENST00000332395 PELOQ9BRX2 385 aaKnown RBP16■□□□□ 0.15
DDX28-201ENST00000332395 ALG8Q9BVK2 526 aa16■□□□□ 0.15
DDX28-201ENST00000332395 ISG20L2Q9H9L3 353 aaKnown RBP16■□□□□ 0.15
DDX28-201ENST00000332395 MCCC2Q9HCC0 563 aa16■□□□□ 0.15
DDX28-201ENST00000332395 BAIAP2Q9UQB8 552 aa16■□□□□ 0.15
DDX28-201ENST00000332395 SMIM30A4D0T7 59 aa16■□□□□ 0.15
DDX28-201ENST00000332395 CCDC182A6NF36 153 aa16■□□□□ 0.15
DDX28-201ENST00000332395 SERINC4A6NH21 518 aa16■□□□□ 0.15
DDX28-201ENST00000332395 HYAL3O43820 417 aaPredicted RBP16■□□□□ 0.15
DDX28-201ENST00000332395 HLA-DPB1P04440 258 aa16■□□□□ 0.15
DDX28-201ENST00000332395 ZNF3P17036 446 aa16■□□□□ 0.15
DDX28-201ENST00000332395 NOS3P29474 1203 aa16■□□□□ 0.15
DDX28-201ENST00000332395 GALNSP34059 522 aa16■□□□□ 0.15
DDX28-201ENST00000332395 EPHA4P54764 986 aa16■□□□□ 0.15
DDX28-201ENST00000332395 DEFA1P59665 94 aa16■□□□□ 0.15
DDX28-201ENST00000332395 DEFA3P59666 94 aa16■□□□□ 0.15
DDX28-201ENST00000332395 CRMP1Q14194 572 aa16■□□□□ 0.15
DDX28-201ENST00000332395 CPEB4Q17RY0 729 aaKnown RBP eCLIP16■□□□□ 0.15
DDX28-201ENST00000332395 VASNQ6EMK4 673 aa16■□□□□ 0.15
DDX28-201ENST00000332395 CCBE1Q6UXH8 406 aaPredicted RBP16■□□□□ 0.15
DDX28-201ENST00000332395 CHRDL2Q6WN34 429 aa16■□□□□ 0.15
DDX28-201ENST00000332395 ATP6V1C2Q8NEY4 427 aa16■□□□□ 0.15
DDX28-201ENST00000332395 C1orf216Q8TAB5 229 aa16■□□□□ 0.15
DDX28-201ENST00000332395 TBX5Q99593 518 aa16■□□□□ 0.15
DDX28-201ENST00000332395 TEAD3Q99594 435 aa16■□□□□ 0.15
DDX28-201ENST00000332395 HDHD5Q9BXW7 423 aa16■□□□□ 0.15
DDX28-201ENST00000332395 OR51V1Q9H2C8 321 aa16■□□□□ 0.15
DDX28-201ENST00000332395 ABCB9Q9NP78 766 aa16■□□□□ 0.15
DDX28-201ENST00000332395 PRODH2Q9UF12 536 aa16■□□□□ 0.15
DDX28-201ENST00000332395 RNF215Q9Y6U7 377 aa16■□□□□ 0.15
DDX28-201ENST00000332395 EFCAB7A8K855 629 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 C17orf105B2RV13 164 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 GNB5O14775 395 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 REM1O75628 298 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 PEPDP12955 493 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 SLC6A6P31641 620 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 CSNK1EP49674 416 aaKnown RBP15.99■□□□□ 0.15
DDX28-201ENST00000332395 SLC16A1P53985 500 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 GDPD3Q7L5L3 318 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 SDR16C5Q8N3Y7 309 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 GALNT6Q8NCL4 622 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 IL17RDQ8NFM7 739 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 TIMP4Q99727 224 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 LANCL2Q9NS86 450 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 SPAG17Q6Q759 2223 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 A0A1W2PQL4 384 aaPredicted RBP15.99■□□□□ 0.15
DDX28-201ENST00000332395 FAM172BPA6NC97 362 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 GABRPO00591 440 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 CCNKO75909 580 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 IL9P15248 144 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 HK1P19367 917 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 BDH1Q02338 343 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 CSTF1Q05048 431 aaKnown RBP15.99■□□□□ 0.15
DDX28-201ENST00000332395 ZNF79Q15937 498 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 ZMAT1Q5H9K5 638 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 RSBN1Q5VWQ0 802 aaPredicted RBP15.99■□□□□ 0.15
DDX28-201ENST00000332395 TTLL10Q6ZVT0 673 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 OR8H2Q8N162 312 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 SLC43A2Q8N370 569 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 ZSCAN1Q8NBB4 408 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 CYB561A3Q8NBI2 242 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 OR10H4Q8NGA5 316 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 DNAJA4Q8WW22 397 aaPredicted RBP15.99■□□□□ 0.15
DDX28-201ENST00000332395 OR2B2Q9GZK3 357 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 MIXL1Q9H2W2 232 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 CUTCQ9NTM9 273 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 ASB6Q9NWX5 421 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 NPAP1Q9NZP6 1156 aa15.99■□□□□ 0.15
DDX28-201ENST00000332395 ABCA7Q8IZY2 2146 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 LAMA1P25391 3075 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 DAPL1A0PJW8 107 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 A6NL46 340 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 CASKO14936 926 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 PRKNO60260 465 aaPredicted RBP15.98■□□□□ 0.15
DDX28-201ENST00000332395 PIAS2O75928 621 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 OR2B3O76000 313 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 CLUP10909 449 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 SLC2A5P22732 501 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 GPR143P51810 404 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 BIKQ13323 160 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 AGAP6Q5VW22 663 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 ARHGAP11AQ6P4F7 1023 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 MARCH9Q86YJ5 346 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 AP3S1Q92572 193 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 SENP5Q96HI0 755 aaPredicted RBP15.98■□□□□ 0.15
DDX28-201ENST00000332395 AHCYL2Q96HN2 611 aaKnown RBP15.98■□□□□ 0.15
DDX28-201ENST00000332395 ART5Q96L15 291 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 AGAP4Q96P64 663 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 LMF1Q96S06 567 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 MKKSQ9NPJ1 570 aaPredicted RBP15.98■□□□□ 0.15
DDX28-201ENST00000332395 BABAM2Q9NXR7 383 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 MUTYHQ9UIF7 546 aa15.98■□□□□ 0.15
DDX28-201ENST00000332395 CENPBD1B2RD01 187 aa15.97■□□□□ 0.15
DDX28-201ENST00000332395 H3BMH7 237 aa15.97■□□□□ 0.15
DDX28-201ENST00000332395 IDH3BO43837 385 aa15.97■□□□□ 0.15
DDX28-201ENST00000332395 KRT8P05787 483 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms