RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 GALNT6Q8NCL4 622 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 SETD6Q8TBK2 473 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 EFHD2Q96C19 240 aaPredicted RBP13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 CLIP3Q96DZ5 547 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 COQ7Q99807 217 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 ATF6BQ99941 703 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 TTTY10Q9BZA0 68 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 ADGRL4Q9HBW9 690 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 RPS6KB2Q9UBS0 482 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 PLCL2Q9UPR0 1127 aa13.67□□□□□ -0.22
CLCNKA-201ENST00000331433 POLR1CO15160 346 aaPredicted RBP13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 SBK2P0C263 348 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 HK1P19367 917 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 CASP3P42574 277 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 FUT7Q11130 342 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 GXYLT1Q4G148 440 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 ARL9Q6T311 187 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 LINC00114Q6XXX2 140 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 ZNF550Q7Z398 422 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 EGFL6Q8IUX8 553 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 ZNF687Q8N1G0 1237 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 GATSQ8NAP1 163 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 SDR9C7Q8NEX9 313 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 OR5M3Q8NGP4 307 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 OR4K13Q8NH42 304 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 ZNF285Q96NJ3 590 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 ERMAPQ96PL5 475 aaPredicted RBP13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 G6PC3Q9BUM1 346 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 RNF32Q9H0A6 362 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 TRIOBPQ9H2D6 2365 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 TTYH1Q9H313 450 aaPredicted RBP13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 ZMIZ1Q9ULJ6 1067 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 CLCA3PQ9Y6N3 262 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 LILRA5A6NI73 299 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 METTL12A8MUP2 240 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 ZNF749O43361 778 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 IMPDH2P12268 514 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 SLC6A6P31641 620 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 TMED10P49755 219 aaKnown RBP13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 E2F1Q01094 437 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 BDH1Q02338 343 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 TDGQ13569 410 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 RPTNQ6XPR3 784 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 NR2C2APQ86WQ0 139 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 GHDCQ8N2G8 530 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 ZNF615Q8N8J6 731 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 OR51L1Q8NGJ5 315 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 OR5W2Q8NH69 310 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 SMPDL3BQ92485 455 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 C4orf36Q96KX1 117 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 PPIL3Q9H2H8 161 aaKnown RBP13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 TRIM36Q9NQ86 728 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 SLC2A4RGQ9NR83 387 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 POLHQ9Y253 713 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 PCDHGB2Q9Y5G2 931 aa13.66□□□□□ -0.22
CLCNKA-201ENST00000331433 SERINC4A6NH21 518 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 RGS9O75916 674 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 CLPSP04118 112 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 GUSBP08236 651 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 APEX1P27695 318 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 CD1CP29017 333 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 OR12D2P58182 307 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 ZNF85Q03923 595 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 SCN1BQ07699 218 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 FAM27D1Q5T7N8 215 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 CNIH2Q6PI25 160 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 SSX6Q7RTT6 188 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 RFLNBQ8N5W9 214 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 ZNF321PQ8N8H1 164 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 OR52E2Q8NGJ4 325 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 SENP5Q96HI0 755 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 PHF7Q9BWX1 381 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 PDE7BQ9NP56 450 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 PAIP2BQ9ULR5 123 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 ADAM18Q9Y3Q7 739 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 CABIN1Q9Y6J0 2220 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 TLCD2A6NGC4 264 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 A8MU76 341 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 C17orf105B2RV13 164 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 MCIDASD6RGH6 385 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 J3QLW9 94 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 HIST1H1CP16403 213 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 ZNF19P17023 458 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 HCCSP53701 268 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 HSD17B7P56937 341 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 OR2B6P58173 313 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 PPP3R1P63098 170 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 UBXN2BQ14CS0 331 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 UBE2J2Q8N2K1 259 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 GDPD1Q8N9F7 314 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 FAM98AQ8NCA5 519 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 C17orf47Q8NEP4 570 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 FAM174AQ8TBP5 190 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 ZMYND19Q96E35 227 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 NDC1Q9BTX1 674 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 YIPF2Q9BWQ6 316 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 EVA1AQ9H8M9 152 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 UCKL1Q9NWZ5 548 aa13.65□□□□□ -0.22
CLCNKA-201ENST00000331433 UNC13CQ8NB66 2214 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms