RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 HPGDP15428 266 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 CADM2Q8N3J6 435 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 PARP16Q8N5Y8 322 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 ZNF441Q8N8Z8 693 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 TEX47Q8TBZ9 253 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 SLC26A1Q9H2B4 701 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 ATP13A2Q9NQ11 1180 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 QPCTLQ9NXS2 382 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 PRKYO43930 277 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 ENTPD6O75354 484 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 CD59P13987 128 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 MAKP20794 623 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 TBXA2RP21731 343 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 S100A5P33763 92 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 ADH7P40394 386 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 ETV6P41212 452 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 SMSP52788 366 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 MRPL14Q6P1L8 145 aaKnown RBP18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 FAM199XQ6PEV8 388 aaPredicted RBP18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 KIRREL2Q6UWL6 708 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 ZNF527Q8NB42 609 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 APCDD1LQ8NCL9 501 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 OR8J1Q8NGP2 316 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 HPS1Q92902 700 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 Q96MT0 163 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 TAPBPLQ9BX59 468 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 DPH1Q9BZG8 443 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 KRCC1Q9NPI7 259 aaPredicted RBP18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 IL20Q9NYY1 176 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 PEX16Q9Y5Y5 336 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 KMT2EQ8IZD2 1858 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 SCDO00767 359 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 OIP5O43482 229 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 TSPAN2O60636 221 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 IFI30P13284 250 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 EFNB1P98172 346 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 DOC2BQ14184 412 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 MED22Q15528 200 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 TIMM50Q3ZCQ8 353 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 ALG10BQ5I7T1 473 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 CLEC12AQ5QGZ9 265 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 SLC27A4Q6P1M0 643 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 NCCRP1Q6ZVX7 275 aaPredicted RBP18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 CYP4Z2PQ8N1L4 340 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 FAM71CQ8NEG0 241 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 PHOSPHO1Q8TCT1 267 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 WDR77Q9BQA1 342 aaPredicted RBP18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 CRB3Q9BUF7 120 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 SEMA4CQ9C0C4 833 aa18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 MEPEQ9NQ76 525 aaPredicted RBP18.58■□□□□ 0.57
RIPPLY3-201ENST00000329553 CCRL2O00421 344 aa18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 GALR2O43603 387 aaPredicted RBP18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 TLX2O43763 284 aaPredicted RBP18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 ICOSLGO75144 302 aa18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 RFPL3O75679 317 aa18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 FUT1P19526 365 aa18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 PCYT1AP49585 367 aa18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 RNF4P78317 190 aa18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 TSTQ16762 297 aaKnown RBP18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 BCDIN3DQ7Z5W3 292 aaKnown RBP18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 FAM83FQ8NEG4 500 aaPredicted RBP18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 HS6ST2Q96MM7 605 aa18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 TSSK6Q9BXA6 273 aa18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 POLDIP3Q9BY77 421 aaKnown RBP18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 SACM1LQ9NTJ5 587 aa18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 DNAJC27Q9NZQ0 273 aa18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 MED31Q9Y3C7 131 aa18.58■□□□□ 0.56
RIPPLY3-201ENST00000329553 ABCD3P28288 659 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 IL12BP29460 328 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 PLCXD2Q0VAA5 305 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 SSX1Q16384 188 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 CCDC157Q569K6 752 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 TMEM201Q5SNT2 666 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 FAM69BQ5VUD6 431 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 ULK3Q6PHR2 472 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 PAPD4Q6PIY7 484 aaKnown RBP18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 LINC00114Q6XXX2 140 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 ZNF620Q6ZNG0 422 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 MRGPREQ86SM8 312 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 OIT3Q8WWZ8 545 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 OSTF1Q92882 214 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 OMA1Q96E52 524 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 ZNF426Q9BUY5 554 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 RTN4RQ9BZR6 473 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 COL27A1Q8IZC6 1860 aaPredicted RBP18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 TMED10P49755 219 aaKnown RBP18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 SNAPC1Q16533 368 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 CBLN3Q6UW01 205 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 CPEB2Q7Z5Q1 589 aaKnown RBP18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 SLC34A3Q8N130 599 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 FAM26EQ8N5C1 309 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 POC5Q8NA72 575 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 C17orf47Q8NEP4 570 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 WDR36Q8NI36 951 aaKnown RBP18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 FGF11Q92914 225 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 C8orf44Q96CB5 159 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 BPIFA2Q96DR5 249 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 SLC39A1Q9NY26 324 aa18.57■□□□□ 0.56
RIPPLY3-201ENST00000329553 RPS6KB2Q9UBS0 482 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms