RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 PTPN18Q99952 460 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 RHBGQ9H310 441 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 ANKRD61A6NGH8 418 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 KIAA0355O15063 1070 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 EIF4E2O60573 245 aaKnown RBP11.83□□□□□ -0.52
CCDC60-201ENST00000327554 ARL6IP5O75915 188 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 DPP4P27487 766 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 GATMP50440 423 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 P2RX1P51575 399 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 LGALS3BPQ08380 585 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 KRT33BQ14525 404 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 TAF12Q16514 161 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 FAM74A1Q5RGS3 127 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 PRAMEF14Q5SWL7 426 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 NUDT18Q6ZVK8 323 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 MOB3CQ70IA8 216 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 RAB11FIP2Q7L804 512 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 TMEM17Q86X19 198 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 C2orf73Q8N5S3 287 aaPredicted RBP11.83□□□□□ -0.52
CCDC60-201ENST00000327554 RFLNBQ8N5W9 214 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 DNAAF1Q8NEP3 725 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 SLC25A28Q96A46 364 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 SLC41A3Q96GZ6 507 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 PAWRQ96IZ0 340 aaKnown RBP11.83□□□□□ -0.52
CCDC60-201ENST00000327554 IL17FQ96PD4 163 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 C1QTNF2Q9BXJ5 285 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 MFFQ9GZY8 342 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 TAS2R3Q9NYW6 316 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 CYB5R1Q9UHQ9 305 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 SLC13A4Q9UKG4 626 aa11.83□□□□□ -0.52
CCDC60-201ENST00000327554 A0A1B0GW55 424 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 SLC22A31A6NKX4 558 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 OGG1O15527 345 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 ATG12O94817 140 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 SERPINA3P01011 423 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 EGFP01133 1207 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 DUX4L2P0CJ85 424 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 DUX4L3P0CJ86 424 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 DUX4L4P0CJ87 422 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 DUX4L5P0CJ88 424 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 DUX4L6P0CJ89 424 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 DUX4L7P0CJ90 424 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 UBE2MP61081 183 aaKnown RBP11.82□□□□□ -0.52
CCDC60-201ENST00000327554 HES5Q5TA89 166 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 STPG1Q5TH74 334 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 PRAMEF8Q5VWM4 474 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 PRAMEF7Q5VXH5 474 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 TMEM88Q6PEY1 159 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 ZNF613Q6PF04 617 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 LRRN1Q6UXK5 716 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 TMEM150AQ86TG1 271 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 OR2AK2Q8NG84 335 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 GLYATL1Q969I3 302 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 PEX11GQ96HA9 241 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 OR14A2Q96R54 314 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 MCHR1Q99705 422 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 DUX4Q9UBX2 424 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 TCF20Q9UGU0 1960 aaKnown RBP11.82□□□□□ -0.52
CCDC60-201ENST00000327554 MYOFQ9NZM1 2061 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 LINC00587B1AMM8 73 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 GPR31O00270 319 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 KPNA3O00505 521 aaPredicted RBP11.82□□□□□ -0.52
CCDC60-201ENST00000327554 GOSR2O14653 212 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 RASGRP1O95267 797 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 POP4O95707 220 aaKnown RBP11.82□□□□□ -0.52
CCDC60-201ENST00000327554 NOS3P29474 1203 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 OR1D2P34982 312 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 GDI2P50395 445 aaKnown RBP11.82□□□□□ -0.52
CCDC60-201ENST00000327554 ART1P52961 327 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 SLC16A1P53985 500 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 PPP2CBP62714 309 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 PPP2CAP67775 309 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 ELP2Q6IA86 826 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 LDLRAD3Q86YD5 345 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 CFAP206Q8IYR0 622 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 LNX2Q8N448 690 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 OR4D10Q8NGI6 311 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 FIBINQ8TAL6 211 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 SETD7Q8WTS6 366 aaKnown RBP11.82□□□□□ -0.52
CCDC60-201ENST00000327554 BCL7CQ8WUZ0 217 aaPredicted RBP11.82□□□□□ -0.52
CCDC60-201ENST00000327554 SMPDL3BQ92485 455 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 ZNF689Q96CS4 500 aaPredicted RBP11.82□□□□□ -0.52
CCDC60-201ENST00000327554 TCEAL4Q96EI5 215 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 OR51V1Q9H2C8 321 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 EQTNQ9NQ60 294 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 BIN3Q9NQY0 253 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 TAS2R10Q9NYW0 307 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 FOXJ3Q9UPW0 622 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 HS3ST2Q9Y278 367 aa11.82□□□□□ -0.52
CCDC60-201ENST00000327554 TMEM272A0A1B0GTI8 110 aa11.81□□□□□ -0.52
CCDC60-201ENST00000327554 UBE2QL1A1L167 161 aa11.81□□□□□ -0.52
CCDC60-201ENST00000327554 UNC119BA6NIH7 251 aa11.81□□□□□ -0.52
CCDC60-201ENST00000327554 MAGEB4O15481 346 aaPredicted RBP11.81□□□□□ -0.52
CCDC60-201ENST00000327554 SULT1B1O43704 296 aa11.81□□□□□ -0.52
CCDC60-201ENST00000327554 FMO6PO60774 539 aa11.81□□□□□ -0.52
CCDC60-201ENST00000327554 CLUP10909 449 aa11.81□□□□□ -0.52
CCDC60-201ENST00000327554 PRG2P13727 222 aa11.81□□□□□ -0.52
CCDC60-201ENST00000327554 ACHEP22303 614 aa11.81□□□□□ -0.52
CCDC60-201ENST00000327554 SLC2A5P22732 501 aa11.81□□□□□ -0.52
CCDC60-201ENST00000327554 NCBP2P52298 156 aaKnown RBP eCLIP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms