RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 GIMAP5Q96F15 307 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 LRRC46Q96FV0 321 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 MCCC2Q9HCC0 563 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 TCF7L1Q9HCS4 588 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 MYOZ1Q9NP98 299 aaPredicted RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 V9GY05 133 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 GXYLT2A0PJZ3 443 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 CHURC1-FNTBB4DL54 471 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 RTCAO00442 366 aaKnown RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 MAN2B1O00754 1011 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 EIF1AYO14602 144 aaKnown RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ADAM12O43184 909 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ATG12O94817 140 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 HPP00738 406 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 EIF1AXP47813 144 aaKnown RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 MAT1AQ00266 395 aaKnown RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 MC2RQ01718 297 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 TOMM20Q15388 145 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF660Q6AZW8 331 aaPredicted RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 OR4C11Q6IEV9 310 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 PRSS55Q6UWB4 352 aaPredicted RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 RTN4RL1Q86UN2 441 aaPredicted RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 SKA3Q8IX90 412 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 CFAP206Q8IYR0 622 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 CMTM4Q8IZR5 234 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 OR52I2Q8NH67 350 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM239Q8WW34 195 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ST8SIA2Q92186 375 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 USB1Q9BQ65 265 aaKnown RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 DPH7Q9BTV6 452 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 CD84Q9UIB8 345 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 LOC285556D6RIA3 1793 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 TRIP11Q15643 1979 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 PRNPP04156 253 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 RPL17P18621 184 aaKnown RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 PDHA2P29803 388 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 MEOX2P50222 304 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 GPR143P51810 404 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 HCCSP53701 268 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 MEF2AQ02078 507 aaPredicted RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 RAB33AQ14088 237 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 CCL14Q16627 93 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 Q499Y3 187 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF417Q8TAU3 575 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 OTUB2Q96DC9 234 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 NARS2Q96I59 477 aaKnown RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 PGLYRP3Q96LB9 341 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 PRDM9Q9NQV7 894 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 SLC17A5Q9NRA2 495 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 MYEF2Q9P2K5 600 aaKnown RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 GPR160Q9UJ42 338 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 FBXL2Q9UKC9 423 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 SIRT4Q9Y6E7 314 aaPredicted RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 PRAMEF27A3QJZ7 478 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 CNR1P21554 472 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 GPR85P60893 370 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 FZD5Q13467 585 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 SWI5Q1ZZU3 235 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 UNQ9370/PRO34162Q6UXP9 181 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 RFLNAQ6ZTI6 216 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM173Q86WV6 379 aaPredicted RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 GLB1L2Q8IW92 636 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 SLC35F3Q8IY50 421 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 OR4D10Q8NGI6 311 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 OR2AG1Q9H205 316 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 OR51V1Q9H2C8 321 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 KCNK12Q9HB15 430 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 MRPL17Q9NRX2 175 aaKnown RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 METTL21EPA6NDL7 271 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ACOD1A6NK06 481 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 H7BY64 318 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 H7C417 338 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 TMPRSS11DO60235 418 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 PAPLNO95428 1278 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 SMIM6P0DI80 62 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ACVR1BP36896 505 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 RFC3P40938 356 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 RAD52P43351 418 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 GPNMBQ14956 572 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ZMYND11Q15326 602 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF805Q5CZA5 627 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 SLC35D3Q5M8T2 416 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 FAM220AQ7Z4H9 259 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 RNF180Q86T96 592 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 NKAIN4Q8IVV8 208 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 OR51Q1Q8NH59 317 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 SP7Q8TDD2 431 aaPredicted RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 C4orf36Q96KX1 117 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 MNTQ99583 582 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ZDHHC5Q9C0B5 715 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 EQTNQ9NQ60 294 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 MTFP1Q9UDX5 166 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF629Q9UEG4 869 aaPredicted RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 TAC3Q9UHF0 121 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF107Q9UII5 783 aaPredicted RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 MCIDASD6RGH6 385 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 SELENOFO60613 162 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 HIST1H1TP22492 207 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms