RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 LACRTQ9GZZ8 138 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 PIGMQ9H3S5 423 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 CSNK1G1Q9HCP0 422 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF70Q9UC06 446 aaPredicted RBP7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF724A8MTY0 619 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 NUDT21O43809 227 aaKnown RBP7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 GPR137BO60478 399 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 FAM155BO75949 473 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 HLA-AP01891 365 aaKnown RBP7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 DDCP20711 480 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 NRLP54845 237 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 PIGFQ07326 219 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 TOR2AQ5JU69 321 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 PRAMEF20Q5VT98 475 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 TMEM182Q6ZP80 229 aaPredicted RBP7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 SLC35C1Q96A29 364 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 RPUSD4Q96CM3 377 aaKnown RBP7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 PBOV1Q9GZY1 135 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 NPVFQ9HCQ7 196 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 MED17Q9NVC6 651 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 B4GALT6Q9UBX8 382 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 PISDQ9UG56 409 aa7.2□□□□□ -1.26
LIMCH1-201ENST00000313860 XKRY2A2RUG3 117 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 SOX15O60248 233 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 CA2P00918 260 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 TGFAP01135 160 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 OR8U8P0C7N1 319 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 ARSAP15289 507 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 KHKP50053 298 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 IL13RA1P78552 427 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 DOC2AQ14183 400 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 CMPK2Q5EBM0 449 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 EEF1DP3Q658K8 133 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF841Q6ZN19 808 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 OR8I2Q8N0Y5 310 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 OR51G2Q8NGK0 314 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 LILRB1Q8NHL6 650 aaPredicted RBP7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 PRSS3P2Q8NHM4 247 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 GBA2Q9HCG7 927 aaPredicted RBP7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 MEIKINA0A087WXM9 373 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 H3BTX0 84 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 H7C4K7 107 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 PRKYO43930 277 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 CNMDO75829 334 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 AQP8O94778 261 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 CLIC3O95833 236 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 CSTAP01040 98 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 FBP1P09467 338 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 CD1EP15812 388 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 RPL10P27635 214 aaKnown RBP7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 RPL22P35268 128 aaKnown RBP7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 NPBWR2P48146 333 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 PGGT1BP53609 377 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 RAP1BP61224 184 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 ZNF92Q03936 586 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 CHADLQ6NUI6 762 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 BPIFA4PQ86YQ2 179 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 CELF5Q8N6W0 485 aaKnown RBP7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 DTWD2Q8NBA8 298 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 PLA2G15Q8NCC3 412 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 OR10Q1Q8NGQ4 319 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 SLC22A18Q96BI1 424 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 UBE2E2Q96LR5 201 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 PAAF1Q9BRP4 392 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 IKZF5Q9H5V7 419 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 ANKRD10Q9NXR5 420 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 MMP24Q9Y5R2 645 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 CEPT1Q9Y6K0 416 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 PTPRTO14522 1441 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 TIMP2P16035 220 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 CLDN6P56747 220 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 DHODHQ02127 395 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 FBXO48Q5FWF7 155 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 SLC35D3Q5M8T2 416 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 ANGEL2Q5VTE6 544 aaKnown RBP7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 LANCL3Q6ZV70 420 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 LRRC56Q8IYG6 542 aaPredicted RBP7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 GPR146Q96CH1 333 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 OR10C1Q96KK4 312 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 ABHD6Q9BV23 337 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 B3GNT5Q9BYG0 378 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 DERL2Q9GZP9 239 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 POFUT1Q9H488 388 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 PLEKHJ1Q9NW61 149 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 MS4A12Q9NXJ0 267 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 ARHGEF10O15013 1369 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 POGZQ7Z3K3 1410 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 TUBGCP6Q96RT7 1819 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 FAM170BA6NMN3 283 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 YJEFN3A6XGL0 299 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 TNFRSF10AO00220 468 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 LDLRAD4O15165 306 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 OR4Q2P0C623 313 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 CALCBP10092 127 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 PFKLP17858 780 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 ADRA2CP18825 462 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 PREPP48147 710 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 MARCKSL1P49006 195 aa7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 AGFG1P52594 562 aaKnown RBP7.19□□□□□ -1.26
LIMCH1-201ENST00000313860 DAG1Q14118 895 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms