RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 HBMQ6B0K9 141 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 WBP2NLQ6ICG8 309 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 C16orf89Q6UX73 402 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 GGNQ86UU5 652 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 MICU2Q8IYU8 434 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 CLIP4Q8N3C7 705 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 SMYD1Q8NB12 490 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 OR10D3Q8NH80 312 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 MBD3L2Q8NHZ7 208 aaPredicted RBP9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 WNT2BQ93097 391 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 CPNE4Q96A23 557 aaPredicted RBP9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 ZNF583Q96ND8 569 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 KCTD14Q9BQ13 255 aaPredicted RBP9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 ALG2Q9H553 416 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 CTPS2Q9NRF8 586 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 ARL8BQ9NVJ2 186 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 CMTM6Q9NX76 183 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 ADA2Q9NZK5 511 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 CLCF1Q9UBD9 225 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 TESQ9UGI8 421 aaKnown RBP9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 RNF6Q9Y252 685 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 HCFC1P51610 2035 aa9.9□□□□□ -0.82
CSPG4P2Y-201ENST00000306853 A1L4Q6 167 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 WIPF3A6NGB9 483 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 FAM90A27PA6NNH2 459 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 H0YC42 278 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 SYT5O00445 386 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 NME4O00746 187 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 FRS3O43559 492 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 CXCL13O43927 109 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 GMNNO75496 209 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 RNF224P0DH78 156 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 TMIGD3P0DMS9 266 aaPredicted RBP9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 CCNA2P20248 432 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 IL11P20809 199 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 CXCR1P25024 350 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 TACR3P29371 465 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 SLC1A3P43003 542 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 GZMMP51124 257 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 SUCLG1P53597 346 aaKnown RBP9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 TPD52P55327 224 aaPredicted RBP9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 LIPEQ05469 1076 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 DMTNQ08495 405 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 PON3Q15166 354 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 SYT14P1Q58G82 188 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 OR2A2Q6IF42 318 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 C8orf82Q6P1X6 216 aaPredicted RBP9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 CCDC80Q76M96 950 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 ADGRE4PQ86SQ3 457 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 MCEMP1Q8IX19 187 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 SLC15A3Q8IY34 581 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 PGAM4Q8N0Y7 254 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 FITM2Q8N6M3 262 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 C9orf106Q8NAJ2 232 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 OR52E4Q8NGH9 312 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 FIG4Q92562 907 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 PROX1Q92786 737 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 DDIT4LQ96D03 193 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 ZHX1-C8orf76Q96EF9 292 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 ZNF845Q96IR2 970 aaPredicted RBP9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 OR5B2Q96R09 309 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 UCN2Q96RP3 112 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 ZNF559Q9BR84 538 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 ABCD2Q9UBJ2 740 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 BAG5Q9UL15 447 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 SLC9A8Q9Y2E8 581 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 ZNF175Q9Y473 711 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 RELNP78509 3460 aa9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 PRRC2CQ9Y520 2896 aaKnown RBP9.89□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 TMED7-TICAM2A0A0A6YYA0 188 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 A0A0G2JNJ9 132 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 A0A0J9YW62 118 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 KDM4EB2RXH2 506 aaPredicted RBP9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 PRSS44E7EML9 344 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 CXCR6O00574 342 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 DVL2O14641 736 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 ADAM11O75078 769 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 PLGP00747 810 aaPredicted RBP9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 C8BP07358 591 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 CALB2P22676 271 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 SHC1P29353 583 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 ACAA2P42765 397 aaKnown RBP9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 KCNJ5P48544 419 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 GSK3BP49841 420 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 MAP2K6P52564 334 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 DLX5P56178 289 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 CARD18P57730 90 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 CSNK2A1P68400 391 aaPredicted RBP9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 CTU2Q2VPK5 515 aaKnown RBP9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 GLIPR1L2Q4G1C9 344 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 SEM1Q6ZVN7 128 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 MAMDC2Q7Z304 686 aaPredicted RBP9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 CCDC71Q8IV32 467 aaPredicted RBP9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 RNF217Q8TC41 542 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 LZICQ8WZA0 190 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 OSTF1Q92882 214 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 FAM162AQ96A26 154 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 TAMM41Q96BW9 452 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 LRRC46Q96FV0 321 aa9.88□□□□□ -0.83
CSPG4P2Y-201ENST00000306853 NSL1Q96IY1 281 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms