RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 SYT9Q86SS6 491 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 ASPGQ86U10 573 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 ZNF761Q86XN6 746 aaPredicted RBP12.47□□□□□ -0.41
CTDP1-202ENST00000299543 ZNF655Q8N720 491 aaPredicted RBP12.47□□□□□ -0.41
CTDP1-202ENST00000299543 BOLLQ8N9W6 283 aaKnown RBP12.47□□□□□ -0.41
CTDP1-202ENST00000299543 ZNF681Q96N22 645 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 ZNF416Q9BWM5 594 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 RAB11FIP5Q9BXF6 653 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 MLXQ9UH92 298 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 FBXL4Q9UKA2 621 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 ARHGEF17Q96PE2 2063 aaPredicted RBP12.47□□□□□ -0.41
CTDP1-202ENST00000299543 CNTRLQ7Z7A1 2325 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 KDM4EB2RXH2 506 aaPredicted RBP12.47□□□□□ -0.41
CTDP1-202ENST00000299543 ELK1P19419 428 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 TLX1P31314 330 aaPredicted RBP12.47□□□□□ -0.41
CTDP1-202ENST00000299543 HCCSP53701 268 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 OR10A3P58181 314 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 PUDPQ08623 228 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 GPR139Q6DWJ6 353 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 ZNF322Q6U7Q0 402 aaPredicted RBP12.47□□□□□ -0.41
CTDP1-202ENST00000299543 ZNF600Q6ZNG1 722 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 MBOAT2Q6ZWT7 520 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 VN1R4Q7Z5H5 301 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 LILRB2Q8N423 598 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 FRMD1Q8N878 549 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 OR5T3Q8NGG3 340 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 OR13C2Q8NGS9 318 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 MARVELD3Q96A59 401 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 ARHGDIGQ99819 225 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 IL20Q9NYY1 176 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 AUP1Q9Y679 476 aa12.47□□□□□ -0.41
CTDP1-202ENST00000299543 SYT5O00445 386 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 CHP2O43745 196 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 HMGN1P05114 100 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 RRASP10301 218 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 MAKP20794 623 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 FPR3P25089 353 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 HAAOP46952 286 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 GBX2P52951 348 aaPredicted RBP12.46□□□□□ -0.41
CTDP1-202ENST00000299543 PRRT3Q5FWE3 981 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 MRPL2Q5T653 305 aaKnown RBP12.46□□□□□ -0.41
CTDP1-202ENST00000299543 MS4A15Q8N5U1 240 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 MOAP1Q96BY2 351 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 COPZ2Q9P299 210 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 ADAM30Q9UKF2 790 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 CDH10Q9Y6N8 788 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 UNC119BA6NIH7 251 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 FAM74A7A6NL05 159 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 E9PI62 339 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 PTP4A3O75365 173 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 C5AR1P21730 350 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 TBXA2RP21731 343 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 EVX1P49640 407 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 RUNX2Q13950 521 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 FAM74A3Q4VXF1 159 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 PRPF38BQ5VTL8 546 aaKnown RBP12.46□□□□□ -0.41
CTDP1-202ENST00000299543 NUDT18Q6ZVK8 323 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 CDK20Q8IZL9 346 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 GJD3Q8N144 294 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 IL17RCQ8NAC3 791 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 MFSD9Q8NBP5 474 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 PATE1Q8WXA2 126 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 ZFP3Q96NJ6 502 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 ZNF768Q9H5H4 540 aaKnown RBP12.46□□□□□ -0.41
CTDP1-202ENST00000299543 NUDT15Q9NV35 164 aa12.46□□□□□ -0.41
CTDP1-202ENST00000299543 SIDT1Q9NXL6 827 aaKnown RBP12.46□□□□□ -0.41
CTDP1-202ENST00000299543 LANCL1O43813 399 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 HTR1FP30939 366 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 NNATQ16517 81 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 DECR1Q16698 335 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 ZNF542PQ5EBM4 170 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 SLC25A30Q5SVS4 291 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 RNLSQ5VYX0 342 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 CEACAM19Q7Z692 300 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 RANBP3LQ86VV4 465 aaPredicted RBP12.46□□□□□ -0.42
CTDP1-202ENST00000299543 UXS1Q8NBZ7 420 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 MS4A4EQ96PG1 132 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 SDF2Q99470 211 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 TIMM29Q9BSF4 260 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 TMEM106CQ9BVX2 250 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 RNF32Q9H0A6 362 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 TMEM168Q9H0V1 697 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 EDARQ9UNE0 448 aa12.46□□□□□ -0.42
CTDP1-202ENST00000299543 TRBV23-1A0A0A0MS06 115 aa12.45□□□□□ -0.42
CTDP1-202ENST00000299543 A0A1W2PPL8 197 aa12.45□□□□□ -0.42
CTDP1-202ENST00000299543 M0R233 179 aa12.45□□□□□ -0.42
CTDP1-202ENST00000299543 P2RX6O15547 441 aa12.45□□□□□ -0.42
CTDP1-202ENST00000299543 GATBO75879 557 aaKnown RBP12.45□□□□□ -0.42
CTDP1-202ENST00000299543 DNASE1P24855 282 aa12.45□□□□□ -0.42
CTDP1-202ENST00000299543 PRKAR1BP31321 381 aa12.45□□□□□ -0.42
CTDP1-202ENST00000299543 PYCR1P32322 319 aa12.45□□□□□ -0.42
CTDP1-202ENST00000299543 GABRA3P34903 492 aa12.45□□□□□ -0.42
CTDP1-202ENST00000299543 MAZP56270 477 aaKnown RBP12.45□□□□□ -0.42
CTDP1-202ENST00000299543 PPP2CBP62714 309 aa12.45□□□□□ -0.42
CTDP1-202ENST00000299543 PPP2CAP67775 309 aa12.45□□□□□ -0.42
CTDP1-202ENST00000299543 SRSF5Q13243 272 aaKnown RBP12.45□□□□□ -0.42
CTDP1-202ENST00000299543 OR1Q1Q15612 314 aa12.45□□□□□ -0.42
CTDP1-202ENST00000299543 TIGD3Q6B0B8 471 aa12.45□□□□□ -0.42
CTDP1-202ENST00000299543 THSD4Q6ZMP0 1018 aa12.45□□□□□ -0.42
CTDP1-202ENST00000299543 WDR88Q6ZMY6 472 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms