RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 INTS12Q96CB8 462 aaKnown RBP12□□□□□ -0.49
VPS28-201ENST00000292510 DNAJA3Q96EY1 480 aa12□□□□□ -0.49
VPS28-201ENST00000292510 TM9SF2Q99805 663 aa12□□□□□ -0.49
VPS28-201ENST00000292510 ECSITQ9BQ95 431 aa12□□□□□ -0.49
VPS28-201ENST00000292510 SRXN1Q9BYN0 137 aa12□□□□□ -0.49
VPS28-201ENST00000292510 COQ10BQ9H8M1 238 aa12□□□□□ -0.49
VPS28-201ENST00000292510 GMPR2Q9P2T1 348 aaKnown RBP12□□□□□ -0.49
VPS28-201ENST00000292510 STOML1Q9UBI4 398 aa12□□□□□ -0.49
VPS28-201ENST00000292510 ARL2BPQ9Y2Y0 163 aa12□□□□□ -0.49
VPS28-201ENST00000292510 CRYBG3Q68DQ2 2970 aa12□□□□□ -0.49
VPS28-201ENST00000292510 DOCK7Q96N67 2140 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 UNC79Q9P2D8 2635 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 AQP8O94778 261 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 RCBTB2O95199 551 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 TMIGD3P0DMS9 266 aaPredicted RBP11.99□□□□□ -0.49
VPS28-201ENST00000292510 CCNA2P20248 432 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 CTSSP25774 331 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 PRKAR1BP31321 381 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 PCGF2P35227 344 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 CPA2P48052 419 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 DLX5P56178 289 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 PCBP3P57721 371 aaKnown RBP11.99□□□□□ -0.49
VPS28-201ENST00000292510 VMACQ2NL98 169 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 GRINAQ7Z429 371 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 CALHM3Q86XJ0 350 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 ADGRG3Q86Y34 549 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 ARMC8Q8IUR7 673 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 ZNF440Q8IYI8 595 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 CADM2Q8N3J6 435 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 SMYD1Q8NB12 490 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 OSTF1Q92882 214 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 ZNF583Q96ND8 569 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 ZNF607Q96SK3 696 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 SH3GL1Q99961 368 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 WFDC6Q9BQY6 131 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 SPATA5L1Q9BVQ7 753 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 ARMC7Q9H6L4 198 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 CMTM6Q9NX76 183 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 OSGIN1Q9UJX0 560 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 ZNF175Q9Y473 711 aa11.99□□□□□ -0.49
VPS28-201ENST00000292510 KLF2Q9Y5W3 355 aaPredicted RBP11.99□□□□□ -0.49
VPS28-201ENST00000292510 TMED7-TICAM2A0A0A6YYA0 188 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 M0QX08 132 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 FAAHO00519 579 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 DVL2O14641 736 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 MFN2O95140 757 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 TACR3P29371 465 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 SLC7A1P30825 629 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 APOBEC1P41238 236 aaKnown RBP11.98□□□□□ -0.49
VPS28-201ENST00000292510 SLC1A3P43003 542 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 NUDT2P50583 147 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 CARD18P57730 90 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 TFF3Q07654 80 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 PDSS1Q5T2R2 415 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 SP5Q6BEB4 398 aaPredicted RBP11.98□□□□□ -0.49
VPS28-201ENST00000292510 ZNF787Q6DD87 383 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 C3orf33Q6P1S2 294 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 DHRS4L2Q6PKH6 230 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 ZNF550Q7Z398 422 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 ROBO4Q8WZ75 1007 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 CMTM5Q96DZ9 223 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 OR5B2Q96R09 309 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 GPATCH1Q9BRR8 931 aaKnown RBP11.98□□□□□ -0.49
VPS28-201ENST00000292510 PRR14Q9BWN1 585 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 PRRG4Q9BZD6 226 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 OR11A1Q9GZK7 315 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 EFCAB1Q9HAE3 211 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 KCNJ16Q9NPI9 418 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 SERINC1Q9NRX5 453 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 CHRNA9Q9UGM1 479 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 ADAM21Q9UKJ8 722 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 TMED7Q9Y3B3 224 aa11.98□□□□□ -0.49
VPS28-201ENST00000292510 CELSR2Q9HCU4 2923 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 IGHV3-15A0A0B4J1V0 119 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 A0A1W2PNV4 684 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 TMEM72A0PK05 275 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 GJE1A6NN92 205 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 SHOX2O60902 331 aaPredicted RBP11.97□□□□□ -0.49
VPS28-201ENST00000292510 SERPINB7O75635 380 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 SYNGR4O95473 234 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 TFPIP10646 304 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 UQCRBP14927 111 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 KLK2P20151 261 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 PRDX6P30041 224 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 POLR2HP52434 150 aaKnown RBP11.97□□□□□ -0.49
VPS28-201ENST00000292510 CRYBA2P53672 197 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 SIRPAP78324 504 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 DUSP7Q16829 419 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 ZSWIM7Q19AV6 140 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 SLC25A35Q3KQZ1 300 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 SYT14P1Q58G82 188 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 C8orf82Q6P1X6 216 aaPredicted RBP11.97□□□□□ -0.49
VPS28-201ENST00000292510 MED12LQ86YW9 2145 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 SLC15A3Q8IY34 581 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 GPR32P1Q8NGA4 272 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 TAMM41Q96BW9 452 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 REXO5Q96IC2 774 aaKnown RBP11.97□□□□□ -0.49
VPS28-201ENST00000292510 ARL5BQ96KC2 179 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 LRRC37BQ96QE4 947 aa11.97□□□□□ -0.49
VPS28-201ENST00000292510 RNF122Q9H9V4 155 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms