RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TSPAN7P41732 249 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 OMPP47874 163 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 ETV1P50549 477 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 PSMD4P55036 377 aaKnown RBP15.47■□□□□ 0.07
CPSF4-201ENST00000292476 DCAF7P61962 342 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 PSPHP78330 225 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 VWA2Q5GFL6 755 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 TYW3Q6IPR3 259 aaKnown RBP15.47■□□□□ 0.07
CPSF4-201ENST00000292476 OVCH1Q7RTY7 1134 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 LAPTM4BQ86VI4 370 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 STT3BQ8TCJ2 826 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 PTPMT1Q8WUK0 201 aaPredicted RBP15.47■□□□□ 0.07
CPSF4-201ENST00000292476 OIT3Q8WWZ8 545 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 HTRA1Q92743 480 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 SENP5Q96HI0 755 aaPredicted RBP15.47■□□□□ 0.07
CPSF4-201ENST00000292476 VSTM2LQ96N03 204 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 LRFN5Q96NI6 719 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 JAM3Q9BX67 310 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 BARHL1Q9BZE3 327 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 INIPQ9NRY2 104 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 OCIAD1Q9NX40 245 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 MRTO4Q9UKD2 239 aaKnown RBP15.47■□□□□ 0.07
CPSF4-201ENST00000292476 NXT1Q9UKK6 140 aaKnown RBP15.47■□□□□ 0.07
CPSF4-201ENST00000292476 CTDSP2O14595 271 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 HYAL3O43820 417 aaPredicted RBP15.46■□□□□ 0.07
CPSF4-201ENST00000292476 BRINP1O60477 761 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 FCMRO60667 390 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 ZGLP1P0C6A0 271 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 SSTR4P31391 388 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 MTNR1AP48039 350 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 PSG6Q00889 435 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 LIPKQ5VXJ0 399 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 HSDL2Q6YN16 418 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 TMPRSS11AQ6ZMR5 421 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 RRM2BQ7LG56 351 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 AKAP14Q86UN6 197 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 ZNF615Q8N8J6 731 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 POGLUT1Q8NBL1 392 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 SIMC1Q8NDZ2 872 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 METTL21AQ8WXB1 218 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 KIAA1143Q96AT1 154 aaPredicted RBP15.46■□□□□ 0.07
CPSF4-201ENST00000292476 RNFT2Q96EX2 444 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 KCNS3Q9BQ31 491 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 PLA2G12AQ9BZM1 189 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 VN1R1Q9GZP7 353 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 SLC26A1Q9H2B4 701 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 TXNL4BQ9NX01 149 aaKnown RBP15.46■□□□□ 0.07
CPSF4-201ENST00000292476 COPS7AQ9UBW8 275 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 GRIP1Q9Y3R0 1128 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 CMAHPQ9Y471 501 aa15.46■□□□□ 0.07
CPSF4-201ENST00000292476 KLF4O43474 513 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 HEXBP07686 556 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 CD63P08962 238 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 TSPAN19P0C672 248 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 FGF9P31371 208 aaPredicted RBP15.45■□□□□ 0.06
CPSF4-201ENST00000292476 SLC9A3P48764 834 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 RGS8P57771 180 aaPredicted RBP15.45■□□□□ 0.06
CPSF4-201ENST00000292476 ACSM1Q08AH1 577 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 DESI1Q6ICB0 168 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 PLEKHM3Q6ZWE6 761 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 MBOAT2Q6ZWT7 520 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 COX15Q7KZN9 410 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 GDPD3Q7L5L3 318 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 BCDIN3DQ7Z5W3 292 aaKnown RBP15.45■□□□□ 0.06
CPSF4-201ENST00000292476 VRK2Q86Y07 508 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 BMPERQ8N8U9 685 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 ANKK1Q8NFD2 765 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 OR8D4Q8NGM9 314 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 C16orf52Q8NHV5 167 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 ASB15Q8WXK1 588 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 UFD1Q92890 307 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 KCTD7Q96MP8 289 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 ZPBPQ9BS86 351 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 EGLN3Q9H6Z9 239 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 IL20Q9NYY1 176 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 ZNF443Q9Y2A4 671 aaPredicted RBP15.45■□□□□ 0.06
CPSF4-201ENST00000292476 V9GYH0 126 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 SPTBP11277 2137 aa15.45■□□□□ 0.06
CPSF4-201ENST00000292476 OR6C76A6NM76 312 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 HMGN1P05114 100 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 GABRA5P31644 462 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 FOXK2Q01167 660 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 CD300CQ08708 224 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 SELENBP1Q13228 472 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 GPR68Q15743 365 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 CD200R1LQ6Q8B3 271 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 CCBE1Q6UXH8 406 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-201ENST00000292476 NCCRP1Q6ZVX7 275 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-201ENST00000292476 OLIG3Q7RTU3 272 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 PRICKLE2Q7Z3G6 844 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 DOK4Q8TEW6 326 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 AP3S1Q92572 193 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 TSLPQ969D9 159 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 TRMT61AQ96FX7 289 aaKnown RBP15.44■□□□□ 0.06
CPSF4-201ENST00000292476 OR10H1Q9Y4A9 318 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 CHST2Q9Y4C5 530 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 PCDHGA1Q9Y5H4 931 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 OR2W5A6NFC9 320 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 MEN1O00255 615 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 RFPL3O75679 317 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms