RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 MRPS18AQ9NVS2 196 aaKnown RBP19.21■□□□□ 0.67
YBX3-202ENST00000279550 DIMT1Q9UNQ2 313 aaKnown RBP19.21■□□□□ 0.67
YBX3-202ENST00000279550 CARD8Q9Y2G2 431 aa19.21■□□□□ 0.67
YBX3-202ENST00000279550 PMF1-BGLAPU3KQ54 211 aa19.21■□□□□ 0.67
YBX3-202ENST00000279550 TEX51A0A1B0GUA7 166 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 SYNDIG1LA6NDD5 238 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 FRG2CA6NGY1 282 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 IDSB3KWA1 339 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 GNB5O14775 395 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 DYRK3O43781 588 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 UTS2O95399 124 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 RAB36O95755 333 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 ETV1P50549 477 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 DCTN2Q13561 401 aaKnown RBP19.2■□□□□ 0.66
YBX3-202ENST00000279550 EBPQ15125 230 aaKnown RBP19.2■□□□□ 0.66
YBX3-202ENST00000279550 SSX1Q16384 188 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 SOWAHCQ53LP3 525 aaPredicted RBP19.2■□□□□ 0.66
YBX3-202ENST00000279550 ALG10BQ5I7T1 473 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 C3orf38Q5JPI3 329 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 RNLSQ5VYX0 342 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 FAAH2Q6GMR7 532 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 FAM199XQ6PEV8 388 aaPredicted RBP19.2■□□□□ 0.66
YBX3-202ENST00000279550 APOOLQ6UXV4 268 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 CYP4Z2PQ8N1L4 340 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 NANOGP1Q8N7R0 232 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 GALNT6Q8NCL4 622 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 MR1Q95460 341 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 GAL3ST4Q96RP7 486 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 SPSB2Q99619 263 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 PRRG3Q9BZD7 231 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 C9orf172C9J069 976 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 M0R3G1 203 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 BHLHE40O14503 412 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 SHFQ7M4L6 423 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 FAM71CQ8NEG0 241 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 OR14A16Q8NHC5 309 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 PLEKHA8Q96JA3 519 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 MESP1Q9BRJ9 268 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 RNF167Q9H6Y7 350 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 WDR54Q9H977 334 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 FGF20Q9NP95 211 aaPredicted RBP19.2■□□□□ 0.66
YBX3-202ENST00000279550 HINT3Q9NQE9 182 aaKnown RBP19.2■□□□□ 0.66
YBX3-202ENST00000279550 SIGLEC7Q9Y286 467 aa19.2■□□□□ 0.66
YBX3-202ENST00000279550 RIF1Q5UIP0 2472 aaKnown RBP19.19■□□□□ 0.66
YBX3-202ENST00000279550 TRAV27A0A087WT01 109 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 SOCS6O14544 535 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 HMGN1P05114 100 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 HEXBP07686 556 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 RBM34P42696 430 aaKnown RBP19.19■□□□□ 0.66
YBX3-202ENST00000279550 FHL1Q13642 323 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 C19orf48Q6RUI8 117 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 FAM198BQ6UWH4 519 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 ATCAYQ86WG3 371 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 CDK20Q8IZL9 346 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 KLHDC3Q9BQ90 382 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 TAPBPLQ9BX59 468 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 UBQLN4Q9NRR5 601 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 MED17Q9NVC6 651 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 RPS6KB2Q9UBS0 482 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 ERGIC3Q9Y282 383 aa19.19■□□□□ 0.66
YBX3-202ENST00000279550 C2orf92A0A1B0GVN3 265 aa19.18■□□□□ 0.66
YBX3-202ENST00000279550 CDC14CA4D256 554 aa19.18■□□□□ 0.66
YBX3-202ENST00000279550 C9J4A7 227 aa19.18■□□□□ 0.66
YBX3-202ENST00000279550 PTP4A3O75365 173 aa19.18■□□□□ 0.66
YBX3-202ENST00000279550 NADKO95544 446 aaPredicted RBP19.18■□□□□ 0.66
YBX3-202ENST00000279550 CLK1P49759 484 aaKnown RBP19.18■□□□□ 0.66
YBX3-202ENST00000279550 NOVA1P51513 510 aaKnown RBP19.18■□□□□ 0.66
YBX3-202ENST00000279550 MOGQ16653 247 aa19.18■□□□□ 0.66
YBX3-202ENST00000279550 KLHL22Q53GT1 634 aa19.18■□□□□ 0.66
YBX3-202ENST00000279550 TMEM164Q5U3C3 297 aa19.18■□□□□ 0.66
YBX3-202ENST00000279550 ULK3Q6PHR2 472 aa19.18■□□□□ 0.66
YBX3-202ENST00000279550 TMPRSS12Q86WS5 348 aa19.18■□□□□ 0.66
YBX3-202ENST00000279550 PIAS4Q8N2W9 510 aaPredicted RBP19.18■□□□□ 0.66
YBX3-202ENST00000279550 MND1Q9BWT6 205 aa19.18■□□□□ 0.66
YBX3-202ENST00000279550 ZBTB20Q9HC78 741 aaPredicted RBP19.18■□□□□ 0.66
YBX3-202ENST00000279550 GPN3Q9UHW5 284 aaPredicted RBP19.18■□□□□ 0.66
YBX3-202ENST00000279550 NXT1Q9UKK6 140 aaKnown RBP19.18■□□□□ 0.66
YBX3-202ENST00000279550 CFL2Q9Y281 166 aa19.18■□□□□ 0.66
YBX3-202ENST00000279550 SLC35A3Q9Y2D2 325 aa19.18■□□□□ 0.66
YBX3-202ENST00000279550 IGHV3-20A0A0C4DH32 117 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 SAGP10523 405 aaPredicted RBP19.17■□□□□ 0.66
YBX3-202ENST00000279550 MTNR1AP48039 350 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 BMXP51813 675 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 CDH11P55287 796 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 SKP2Q13309 424 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 SPHARQ15513 63 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 SLC35F1Q5T1Q4 408 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 CPOQ8IVL8 374 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 PROKR2Q8NFJ6 384 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 OR52L1Q8NGH7 329 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 OR51A7Q8NH64 312 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 DAZLQ92904 295 aaKnown RBP19.17■□□□□ 0.66
YBX3-202ENST00000279550 ZHX1-C8orf76Q96EF9 292 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 ADOQ96SZ5 270 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 TEX12Q9BXU0 123 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 HOXD1Q9GZZ0 328 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 DCSTAMPQ9H295 470 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 MED20Q9H944 212 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 PLGRKTQ9HBL7 147 aa19.17■□□□□ 0.66
YBX3-202ENST00000279550 OSGIN1Q9UJX0 560 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms