RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 SLC1A3P43003 542 aa11.48□□□□□ -0.57
SS18-202ENST00000269138 RGS8P57771 180 aaPredicted RBP11.48□□□□□ -0.57
SS18-202ENST00000269138 PMPCAQ10713 525 aa11.48□□□□□ -0.57
SS18-202ENST00000269138 NPTX1Q15818 432 aa11.48□□□□□ -0.57
SS18-202ENST00000269138 CTU2Q2VPK5 515 aaKnown RBP11.48□□□□□ -0.57
SS18-202ENST00000269138 TMEM176BQ3YBM2 270 aaPredicted RBP11.48□□□□□ -0.57
SS18-202ENST00000269138 WBP2NLQ6ICG8 309 aa11.48□□□□□ -0.57
SS18-202ENST00000269138 MEIOBQ8N635 442 aa11.48□□□□□ -0.57
SS18-202ENST00000269138 OR6T1Q8NGN1 323 aa11.48□□□□□ -0.57
SS18-202ENST00000269138 VANGL1Q8TAA9 524 aaPredicted RBP11.48□□□□□ -0.57
SS18-202ENST00000269138 ZPLD1Q8TCW7 415 aa11.48□□□□□ -0.57
SS18-202ENST00000269138 SLC35B4Q969S0 331 aa11.48□□□□□ -0.57
SS18-202ENST00000269138 SLC7A6OSQ96CW6 309 aaPredicted RBP11.48□□□□□ -0.57
SS18-202ENST00000269138 CCDC120Q96HB5 630 aa11.48□□□□□ -0.57
SS18-202ENST00000269138 ZNF845Q96IR2 970 aaPredicted RBP11.48□□□□□ -0.57
SS18-202ENST00000269138 ADGRG7Q96K78 797 aa11.48□□□□□ -0.57
SS18-202ENST00000269138 TRIB1Q96RU8 372 aa11.48□□□□□ -0.57
SS18-202ENST00000269138 VKORC1Q9BQB6 163 aa11.48□□□□□ -0.57
SS18-202ENST00000269138 ADAM19Q9H013 955 aa11.48□□□□□ -0.57
SS18-202ENST00000269138 KLHL28Q9NXS3 571 aa11.48□□□□□ -0.57
SS18-202ENST00000269138 FLNCQ14315 2725 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 TMED7-TICAM2A0A0A6YYA0 188 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 TMEM72A0PK05 275 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 CLEC18AA5D8T8 446 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 CLCA1A8K7I4 914 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 TNFSF11O14788 317 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 PDE5AO76074 875 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 IFNA14P01570 189 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 C8BP07358 591 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 GABRA1P14867 456 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 UQCRBP14927 111 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 ME2P23368 584 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 APOBEC1P41238 236 aaKnown RBP11.47□□□□□ -0.57
SS18-202ENST00000269138 POLR2HP52434 150 aaKnown RBP11.47□□□□□ -0.57
SS18-202ENST00000269138 NUP107P57740 925 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 COPZ1P61923 177 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 ADORA2A-AS1P86434 159 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 BNIP1Q12981 228 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 SELENBP1Q13228 472 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 GLYATQ6IB77 296 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 CLEC18BQ6UXF7 455 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 B3GNT6Q6ZMB0 384 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 VTCN1Q7Z7D3 282 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 TSPYL5Q86VY4 417 aaPredicted RBP11.47□□□□□ -0.57
SS18-202ENST00000269138 CLEC18CQ8NCF0 446 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 OR52E4Q8NGH9 312 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 FAM162AQ96A26 154 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 C3orf49Q96BT1 292 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 DNAJA3Q96EY1 480 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 TPD52L3Q96J77 140 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 CLPTM1LQ96KA5 538 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 KLHL15Q96M94 604 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 MCHR1Q99705 422 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 TTYH2Q9BSA4 534 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 OR11A1Q9GZK7 315 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 PCDHAC1Q9H158 963 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 SH3GLB1Q9Y371 365 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 TMED7Q9Y3B3 224 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 TENM4Q6N022 2769 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 MYO7BQ6PIF6 2116 aa11.47□□□□□ -0.57
SS18-202ENST00000269138 A0A1B0GWA3 101 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 A0A1W2PNR3 127 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 ADAMDEC1O15204 470 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 CXCL13O43927 109 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 ZG16O60844 167 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 TOXO94900 526 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 AGFG2O95081 481 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 ZNF682O95780 498 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 SERPINA1P01009 418 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 HOXD4P09016 255 aaPredicted RBP11.46□□□□□ -0.57
SS18-202ENST00000269138 HTR3AP46098 478 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 OR1E2P47887 323 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 SELENOWP63302 87 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 BNIP2Q12982 314 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 OR1Q1Q15612 314 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 FXNQ16595 210 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 ADGRE4PQ86SQ3 457 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 CARM1Q86X55 608 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 TNIP2Q8NFZ5 429 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 OR10D3Q8NH80 312 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 OR2V1Q8NHB1 315 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 RASSF5Q8WWW0 418 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 PROX1Q92786 737 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 ZNF559Q9BR84 538 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 C1orf21Q9H246 121 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 COQ10BQ9H8M1 238 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 SERINC1Q9NRX5 453 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 CLCF1Q9UBD9 225 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 STOML1Q9UBI4 398 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 CHRNA9Q9UGM1 479 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 BAG5Q9UL15 447 aa11.46□□□□□ -0.57
SS18-202ENST00000269138 GCN1Q92616 2671 aaKnown RBP11.46□□□□□ -0.57
SS18-202ENST00000269138 ZC3H12DA2A288 527 aaKnown RBP11.45□□□□□ -0.58
SS18-202ENST00000269138 TGM6O95932 706 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 LDLRP01130 860 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 TFPIP10646 304 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 PTGER4P35408 488 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 EIF1AXP47813 144 aaKnown RBP11.45□□□□□ -0.58
SS18-202ENST00000269138 NSUN5P2Q63ZY6 315 aa11.45□□□□□ -0.58
SS18-202ENST00000269138 HBMQ6B0K9 141 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms