RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 GRM7Q14831 915 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 LEG1Q6P5S2 330 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 OR13C2Q8NGS9 318 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 CHTF18Q8WVB6 975 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 RAB40AQ8WXH6 277 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 ZNF578Q96N58 590 aaPredicted RBP14.08□□□□□ -0.16
CASC3-201ENST00000264645 LIN7BQ9HAP6 207 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 HINT3Q9NQE9 182 aaKnown RBP14.08□□□□□ -0.16
CASC3-201ENST00000264645 LOXHD1Q8IVV2 1947 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 TMEM82A0PJX8 343 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 MANSC4A6NHS7 340 aaPredicted RBP14.08□□□□□ -0.16
CASC3-201ENST00000264645 CA12O43570 354 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 IGLV3-25P01717 112 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 APEHP13798 732 aaKnown RBP14.08□□□□□ -0.16
CASC3-201ENST00000264645 ZNF20P17024 532 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 CTSOP43234 321 aaPredicted RBP14.08□□□□□ -0.16
CASC3-201ENST00000264645 KIAA0040Q15053 153 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 ST3GAL2Q16842 350 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 HENMT1Q5T8I9 393 aaKnown RBP14.08□□□□□ -0.16
CASC3-201ENST00000264645 ALG1LQ6GMV1 187 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 PSRC1Q6PGN9 363 aaPredicted RBP14.08□□□□□ -0.16
CASC3-201ENST00000264645 OR10Z1Q8NGY1 313 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 UBQLN3Q9H347 655 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 SLC35A3Q9Y2D2 325 aa14.08□□□□□ -0.16
CASC3-201ENST00000264645 SHOXO15266 292 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 KAT7O95251 611 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 ETHE1O95571 254 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 IFNGR1P15260 489 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 TUBG1P23258 451 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 CXCR1P25024 350 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 MRPL19P49406 292 aaKnown RBP14.07□□□□□ -0.16
CASC3-201ENST00000264645 UBE2IP63279 158 aaKnown RBP14.07□□□□□ -0.16
CASC3-201ENST00000264645 SIRPAP78324 504 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 RBM39Q14498 530 aaKnown RBP14.07□□□□□ -0.16
CASC3-201ENST00000264645 LY6G5CQ5SRR4 150 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 OR13C5Q8NGS8 318 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 C3orf49Q96BT1 292 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 NEURL3Q96EH8 262 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 PDXPQ96GD0 296 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 ACTRT3Q9BYD9 372 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 MAN2C1Q9NTJ4 1040 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 FER1L6Q2WGJ9 1857 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 RPS10-NUDT3A0A1W2PQS6 291 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 HEPACAM2A8MVW5 462 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 SULT1B1O43704 296 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 S1PR1P21453 382 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 RPS10P46783 165 aaKnown RBP14.07□□□□□ -0.16
CASC3-201ENST00000264645 LIM2P55344 173 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 ADAM5Q6NVV9 412 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 LIPIQ6XZB0 460 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 SERINC5Q86VE9 423 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 TMEM99Q8N816 258 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 BBS1Q8NFJ9 593 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 PHOSPHO1Q8TCT1 267 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 NEK7Q8TDX7 302 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 FTSJ1Q9UET6 329 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 RBM7Q9Y580 266 aaKnown RBP14.07□□□□□ -0.16
CASC3-201ENST00000264645 IFNA17P01571 189 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 KLKB1P03952 638 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 CAMLGP49069 296 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 ITPRIPL2Q3MIP1 535 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 PDSS1Q5T2R2 415 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 YOD1Q5VVQ6 348 aaPredicted RBP14.07□□□□□ -0.16
CASC3-201ENST00000264645 AFMIDQ63HM1 303 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 LCN10Q6JVE6 187 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 BPIFB2Q8N4F0 458 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 FOXRED1Q96CU9 486 aaPredicted RBP14.07□□□□□ -0.16
CASC3-201ENST00000264645 CHST8Q9H2A9 424 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 TMEM231Q9H6L2 316 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 WNT6Q9Y6F9 365 aa14.07□□□□□ -0.16
CASC3-201ENST00000264645 ARFGEF1Q9Y6D6 1849 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 LRIT2A6NDA9 550 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 SULT1C2O00338 296 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 CLDN4O14493 209 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 GAPDHSO14556 408 aaPredicted RBP14.06□□□□□ -0.16
CASC3-201ENST00000264645 NDUFB2O95178 105 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 CBX7O95931 251 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 CR2P20023 1033 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 NDUFAF7Q7L592 441 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 LRRC25Q8N386 305 aaPredicted RBP14.06□□□□□ -0.16
CASC3-201ENST00000264645 OR14C36Q8NHC7 312 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 ST7LQ8TDW4 575 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 ZBED3Q96IU2 234 aaPredicted RBP14.06□□□□□ -0.16
CASC3-201ENST00000264645 KCNJ16Q9NPI9 418 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 C14orf166Q9Y224 244 aaKnown RBP14.06□□□□□ -0.16
CASC3-201ENST00000264645 RPH3AQ9Y2J0 694 aaPredicted RBP14.06□□□□□ -0.16
CASC3-201ENST00000264645 BORCS7-ASMTA0A0B4J1R7 106 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 MAGEB4O15481 346 aaPredicted RBP14.06□□□□□ -0.16
CASC3-201ENST00000264645 MAOAP21397 527 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 TEAD1P28347 426 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 SQSTM1Q13501 440 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 EIF2B1Q14232 305 aaKnown RBP14.06□□□□□ -0.16
CASC3-201ENST00000264645 TPGS2Q68CL5 300 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 GPR139Q6DWJ6 353 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 TMEM200AQ86VY9 491 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 LINC01465Q8N7H1 131 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 ACBD4Q8NC06 268 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 TMEM255BQ8WV15 326 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 MYLIPQ8WY64 445 aa14.06□□□□□ -0.16
CASC3-201ENST00000264645 MYEOVQ96EZ4 313 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms