RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 BCL2L15Q5TBC7 163 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 ZC3H14Q6PJT7 736 aaKnown RBP15.12■□□□□ 0.01
CTCF-201ENST00000264010 FRRS1Q6ZNA5 592 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 OR4F15Q8NGB8 312 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 ZNF563Q8TA94 476 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 SNX33Q8WV41 574 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 ZG16BQ96DA0 208 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 ALOXE3Q9BYJ1 711 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 TPSD1Q9BZJ3 242 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 PPA2Q9H2U2 334 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 SEMA6CQ9H3T2 930 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 PCOLCE2Q9UKZ9 415 aa15.12■□□□□ 0.01
CTCF-201ENST00000264010 A0A1W2PS29 197 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 OR5K3A6NET4 321 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 CSTAP01040 98 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 HRGP04196 525 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 FAPQ12884 760 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 TSC22D1Q15714 1073 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 ALG10BQ5I7T1 473 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 PAQR6Q6TCH4 344 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 RNF44Q7L0R7 432 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 ZNF527Q8NB42 609 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 TXNDC15Q96J42 360 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 SYNDIG1Q9H7V2 258 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 PDE7BQ9NP56 450 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 TREM1Q9NP99 234 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 UBE2QL1A1L167 161 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 ELOA3DA6NLF2 546 aaPredicted RBP15.11■□□□□ 0.01
CTCF-201ENST00000264010 P2RX6O15547 441 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 SLC35E2P0CK97 266 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 NID1P14543 1247 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 GABRG2P18507 467 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 ETV5P41161 510 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 CENPAP49450 140 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 ETV1P50549 477 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 DUSP2Q05923 314 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 NNATQ16517 81 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 ELOA3BQ3SY89 546 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 PLK5Q496M5 336 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 FTMTQ8N4E7 242 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 METTL27Q8N6F8 245 aaPredicted RBP15.11■□□□□ 0.01
CTCF-201ENST00000264010 ELOA3Q8NG57 546 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 OR5J2Q8NH18 312 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 PELOQ9BRX2 385 aaKnown RBP15.11■□□□□ 0.01
CTCF-201ENST00000264010 PNO1Q9NRX1 252 aaKnown RBP15.11■□□□□ 0.01
CTCF-201ENST00000264010 TMEM129A0AVI4 362 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 PRAMEF27A3QJZ7 478 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 J3QLW9 94 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 GMDSO60547 372 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 GALR3O60755 368 aaPredicted RBP15.11■□□□□ 0.01
CTCF-201ENST00000264010 ZNF19P17023 458 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 SLC1A3P43003 542 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 PPP3R1P63098 170 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 CDK5Q00535 292 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 CRYZQ08257 329 aaKnown RBP15.11■□□□□ 0.01
CTCF-201ENST00000264010 Q8N402 240 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 C19orf47Q8N9M1 422 aaKnown RBP15.11■□□□□ 0.01
CTCF-201ENST00000264010 ZNF681Q96N22 645 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 GAL3ST1Q99999 423 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 PRDM9Q9NQV7 894 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 SIDT1Q9NXL6 827 aaKnown RBP15.11■□□□□ 0.01
CTCF-201ENST00000264010 HELZP42694 1942 aaKnown RBP15.11■□□□□ 0.01
CTCF-201ENST00000264010 ZNF106Q9H2Y7 1883 aaKnown RBP15.11■□□□□ 0.01
CTCF-201ENST00000264010 A0A087WV62 115 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 FAM183AA6NL82 134 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 SRPX2O60687 465 aaPredicted RBP15.11■□□□□ 0.01
CTCF-201ENST00000264010 PRAMEF2O60811 474 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 STOMP27105 288 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 CCR5P51681 352 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 TAS2R43P59537 309 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 HYAL2Q12891 473 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 TATDN3Q17R31 274 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 OR2L13Q8N349 312 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 OR2T35Q8NGX2 323 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 DIO2Q92813 273 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 TGM7Q96PF1 710 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 C12orf57Q99622 126 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 HHATLQ9HCP6 504 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 TXNL4BQ9NX01 149 aaKnown RBP15.11■□□□□ 0.01
CTCF-201ENST00000264010 GPR55Q9Y2T6 319 aaPredicted RBP15.11■□□□□ 0.01
CTCF-201ENST00000264010 PCDHGB7Q9Y5F8 929 aa15.11■□□□□ 0.01
CTCF-201ENST00000264010 A0A1W2PQL4 384 aaPredicted RBP15.1■□□□□ 0.01
CTCF-201ENST00000264010 EPOPA6NHQ4 379 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 PIP5K1CO60331 668 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 ITPKBP27987 946 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 RPS19P39019 145 aaKnown RBP15.1■□□□□ 0.01
CTCF-201ENST00000264010 GPR143P51810 404 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 LRRN1Q6UXK5 716 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 TMEM92Q6UXU6 159 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 RLN3Q8WXF3 142 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 POLE3Q9NRF9 147 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 NDUFB11Q9NX14 153 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 TO15178 435 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 KHDRBS3O75525 346 aaKnown RBP15.1■□□□□ 0.01
CTCF-201ENST00000264010 MRPL3P09001 348 aaKnown RBP15.1■□□□□ 0.01
CTCF-201ENST00000264010 SPNP16150 400 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 TOR2AQ5JU69 321 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 NXNL2Q5VZ03 156 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 ZNF620Q6ZNG0 422 aa15.1■□□□□ 0.01
CTCF-201ENST00000264010 JAZF1Q86VZ6 243 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms