RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 ABHD15Q6UXT9 468 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 DNAJC22Q8N4W6 341 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 NUP43Q8NFH3 380 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 HSD17B8Q92506 261 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 KCNK12Q9HB15 430 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 SPHK2Q9NRA0 654 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 FAM120CQ9NX05 1096 aaKnown RBP10.45□□□□□ -0.74
MSH6-201ENST00000234420 COQ4Q9Y3A0 265 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 NAALAD2Q9Y3Q0 740 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 CHD2O14647 1828 aaKnown RBP10.44□□□□□ -0.74
MSH6-201ENST00000234420 OR6C76A6NM76 312 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 CDK2AP1O14519 115 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 TRAF3IP2O43734 574 aaPredicted RBP10.44□□□□□ -0.74
MSH6-201ENST00000234420 CSF1P09603 554 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 GGT1P19440 569 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 PTGER1P34995 402 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 DUSP7Q16829 419 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 PLEKHS1Q5SXH7 462 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 BRICD5Q6PL45 260 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 OR9A1PQ8NGU1 263 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 SENP5Q96HI0 755 aaPredicted RBP10.44□□□□□ -0.74
MSH6-201ENST00000234420 CNN2Q99439 309 aaKnown RBP10.44□□□□□ -0.74
MSH6-201ENST00000234420 IL26Q9NPH9 171 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 ACOT13Q9NPJ3 140 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 SPHK1Q9NYA1 384 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 NUDT19A8MXV4 375 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 Q1RN00 199 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 CES4AQ5XG92 561 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 SPNS3Q6ZMD2 512 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 ZNF561Q8N587 486 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 OR5AK2Q8NH90 309 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 ZNRF4Q8WWF5 429 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 MARC2Q969Z3 335 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 SLC25A18Q9H1K4 315 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 RNF39Q9H2S5 420 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 PRSS51A0A1B0GVH4 220 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 ANKRD61A6NGH8 418 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 ANKRD30BLA7E2S9 258 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 ALDOAP04075 364 aaKnown RBP10.44□□□□□ -0.74
MSH6-201ENST00000234420 S100A8P05109 93 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 CXADRP78310 365 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 ACTBL2Q562R1 376 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 RDH10Q8IZV5 341 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 C1orf87Q8N0U7 546 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 NAT8LQ8N9F0 302 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 OR2M2Q96R28 347 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 PKMYT1Q99640 499 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 DEFB127Q9H1M4 99 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 OR2T1O43869 369 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 TIMP1P01033 207 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 GRPP07492 148 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 PFKMP08237 780 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 IQCF3P0C7M6 154 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 ZNF888P0CJ79 500 aaPredicted RBP10.44□□□□□ -0.74
MSH6-201ENST00000234420 PDLIM3Q53GG5 364 aaPredicted RBP10.44□□□□□ -0.74
MSH6-201ENST00000234420 LIPIQ6XZB0 460 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 PTRH1Q86Y79 214 aaKnown RBP10.44□□□□□ -0.74
MSH6-201ENST00000234420 YIPF5Q969M3 257 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 OPA3Q9H6K4 179 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 CLEC5AQ9NY25 188 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 YIF1AO95070 293 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 GSTP1P09211 210 aaKnown RBP10.44□□□□□ -0.74
MSH6-201ENST00000234420 C7P10643 843 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 CSNK1EP49674 416 aaKnown RBP10.44□□□□□ -0.74
MSH6-201ENST00000234420 PPP2CAP67775 309 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 TMEM88Q6PEY1 159 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 ASPGQ86U10 573 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 SIGLECL1Q8N7X8 197 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 SLC29A3Q9BZD2 475 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 CEPT1Q9Y6K0 416 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 CKAP5Q14008 2032 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 POM121BA6NF01 834 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 K7ERQ8 282 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 MPIG6BO95866 241 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 EBLN1P0CF75 366 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 NAT2P11245 290 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 CEBPBP17676 345 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 PRPH2P23942 346 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 PTGER4P35408 488 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 CLDN6P56747 220 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 IL10RBQ08334 325 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 GAB1Q13480 694 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 ZNF74Q16587 644 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 RNF212Q495C1 297 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 FBXO46Q6PJ61 603 aaPredicted RBP10.44□□□□□ -0.74
MSH6-201ENST00000234420 WFDC8Q8IUA0 241 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 CPXM2Q8N436 756 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 C11orf42Q8N5U0 333 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 KRTCAP2Q8N6L1 136 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 CELF2-AS1Q8N7Q2 184 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 SLC39A7Q92504 469 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 TECTBQ96PL2 329 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 PARP12Q9H0J9 701 aaKnown RBP10.44□□□□□ -0.74
MSH6-201ENST00000234420 CRLF2Q9HC73 371 aa10.44□□□□□ -0.74
MSH6-201ENST00000234420 ZNF71Q9NQZ8 489 aaPredicted RBP10.44□□□□□ -0.74
MSH6-201ENST00000234420 RYDENQ9NUL5 291 aaKnown RBP10.44□□□□□ -0.74
MSH6-201ENST00000234420 MANBAO00462 879 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 RNASET2O00584 256 aaKnown RBP10.43□□□□□ -0.74
MSH6-201ENST00000234420 COCHO43405 550 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 CNR2P34972 360 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms