RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 NPRL2Q8WTW4 380 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 DVL3Q92997 716 aaPredicted RBP12.8□□□□□ -0.36
NFKB1-201ENST00000226574 GLTPQ9NZD2 209 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 PIKFYVEQ9Y2I7 2098 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 P2RY2P41231 377 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 CARD17Q5XLA6 110 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 CCDC190Q86UF4 302 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 OR52R1Q8NGF1 315 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 OR9A4Q8NGU2 314 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 TGM7Q96PF1 710 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 GABARAPL1Q9H0R8 117 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 EPHA6Q9UF33 1036 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 SLC35A3Q9Y2D2 325 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 HOXD11P31277 338 aaPredicted RBP12.8□□□□□ -0.36
NFKB1-201ENST00000226574 PRSS3P35030 304 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 ACTA2P62736 377 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 ACTG2P63267 376 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 CDC20Q12834 499 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 AIMP2Q13155 320 aaKnown RBP12.8□□□□□ -0.36
NFKB1-201ENST00000226574 IRF4Q15306 451 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 ZNF322Q6U7Q0 402 aaPredicted RBP12.8□□□□□ -0.36
NFKB1-201ENST00000226574 RAB7BQ96AH8 199 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 WDR92Q96MX6 357 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 NKX3-1Q99801 234 aaPredicted RBP12.8□□□□□ -0.36
NFKB1-201ENST00000226574 PSD2Q9BQI7 771 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 ULBP3Q9BZM4 244 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 SYT4Q9H2B2 425 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 NOX4Q9NPH5 578 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 DHDHQ9UQ10 334 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 ERVK-19Q9WJR5 959 aa12.8□□□□□ -0.36
NFKB1-201ENST00000226574 CFL1P23528 166 aaKnown RBP12.79□□□□□ -0.36
NFKB1-201ENST00000226574 HSD11B1P28845 292 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 BCL6P41182 706 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 FRKP42685 505 aaPredicted RBP12.79□□□□□ -0.36
NFKB1-201ENST00000226574 SNRPGP62308 76 aaKnown RBP12.79□□□□□ -0.36
NFKB1-201ENST00000226574 CDRT4Q8N9R6 151 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 DNAAF1Q8NEP3 725 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 NR4A3Q92570 626 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 ELP4Q96EB1 424 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 ADOQ96SZ5 270 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 POTEKPQ9BYX7 375 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 SPHK1Q9NYA1 384 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 COPZ2Q9P299 210 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 CCL27Q9Y4X3 112 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 HCFC2Q9Y5Z7 792 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 V9GY05 133 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 TEX13DA0A0J9YY54 714 aaPredicted RBP12.79□□□□□ -0.36
NFKB1-201ENST00000226574 OR2W5A6NFC9 320 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 PRRT4C9JH25 899 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 GP1BBP13224 206 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 PRKACAP17612 351 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 GZMKP49863 264 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 RPS15AP62244 130 aaKnown RBP12.79□□□□□ -0.36
NFKB1-201ENST00000226574 FOXK2Q01167 660 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 C1orf189Q5VU69 101 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 HBMQ6B0K9 141 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 FAM26EQ8N5C1 309 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 OR5T3Q8NGG3 340 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 OR2AJ1Q8NGZ0 328 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 SLC25A44Q96H78 314 aaPredicted RBP12.79□□□□□ -0.36
NFKB1-201ENST00000226574 MAFFQ9ULX9 164 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 NPIPA5E9PKD4 350 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 CCR2P41597 374 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 RBM34P42696 430 aaKnown RBP12.79□□□□□ -0.36
NFKB1-201ENST00000226574 PXNP49023 591 aaPredicted RBP12.79□□□□□ -0.36
NFKB1-201ENST00000226574 RNASE10Q5GAN6 216 aaKnown RBP12.79□□□□□ -0.36
NFKB1-201ENST00000226574 TCTE1Q5JU00 501 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 ARHGAP40Q5TG30 622 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 METTL11BQ5VVY1 283 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 GLT8D1Q68CQ7 371 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 FGF13Q92913 245 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 ELF4Q99607 663 aaPredicted RBP12.79□□□□□ -0.36
NFKB1-201ENST00000226574 ZFYVE21Q9BQ24 234 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 NPIPA1Q9UND3 350 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 GPR34Q9UPC5 381 aa12.79□□□□□ -0.36
NFKB1-201ENST00000226574 TRDV1A0A1B0GX56 115 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 TRABD2BA6NFA1 517 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 TNFRSF10AO00220 468 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 TNFP01375 233 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 CTGFP29279 349 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 MAT1AQ00266 395 aaKnown RBP12.78□□□□□ -0.36
NFKB1-201ENST00000226574 GRM7Q14831 915 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 TRAM1Q15629 374 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 OR7E24Q6IFN5 339 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 LMX1AQ8TE12 382 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 BADQ92934 168 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 ZC3H10Q96K80 434 aaKnown RBP12.78□□□□□ -0.36
NFKB1-201ENST00000226574 NT5DC2Q9H857 520 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 MBNL1Q9NR56 388 aaKnown RBP12.78□□□□□ -0.36
NFKB1-201ENST00000226574 NDUFB11Q9NX14 153 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 CLDND1Q9NY35 253 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 ADAM18Q9Y3Q7 739 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 SDC3O75056 442 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 RAB3DO95716 219 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 PSMB1P20618 241 aaKnown RBP12.78□□□□□ -0.36
NFKB1-201ENST00000226574 GPLD1P80108 840 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 SORDQ00796 357 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 DUSP5Q16690 384 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 RPL13AP3Q6NVV1 102 aa12.78□□□□□ -0.36
NFKB1-201ENST00000226574 ULK3Q6PHR2 472 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms