RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 NDUFB2O95178 105 aa12.78□□□□□ -0.36
SIX4-201ENST00000216513 SLC35E2P0CK97 266 aa12.78□□□□□ -0.36
SIX4-201ENST00000216513 XKRXQ6PP77 449 aa12.78□□□□□ -0.36
SIX4-201ENST00000216513 WDR5BQ86VZ2 330 aa12.78□□□□□ -0.36
SIX4-201ENST00000216513 SAMD12Q8N8I0 201 aa12.78□□□□□ -0.36
SIX4-201ENST00000216513 KHSRPQ92945 711 aaKnown RBP eCLIP12.78□□□□□ -0.36
SIX4-201ENST00000216513 LMF2Q9BU23 707 aaKnown RBP12.78□□□□□ -0.36
SIX4-201ENST00000216513 KDM4EB2RXH2 506 aaPredicted RBP12.78□□□□□ -0.36
SIX4-201ENST00000216513 SSX5O60225 188 aa12.78□□□□□ -0.36
SIX4-201ENST00000216513 RGS6P49758 472 aa12.78□□□□□ -0.36
SIX4-201ENST00000216513 DUSP2Q05923 314 aa12.78□□□□□ -0.36
SIX4-201ENST00000216513 PLCXD3Q63HM9 321 aa12.78□□□□□ -0.36
SIX4-201ENST00000216513 CCDC36Q8IYA8 594 aa12.78□□□□□ -0.36
SIX4-201ENST00000216513 OR1J2Q8NGS2 313 aa12.78□□□□□ -0.36
SIX4-201ENST00000216513 TIMD4Q96H15 378 aa12.78□□□□□ -0.36
SIX4-201ENST00000216513 RIMS3Q9UJD0 308 aa12.78□□□□□ -0.36
SIX4-201ENST00000216513 ORC5O43913 435 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 PRKNO60260 465 aaPredicted RBP12.77□□□□□ -0.36
SIX4-201ENST00000216513 CISD3P0C7P0 127 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 GLT8D1Q68CQ7 371 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 SLCO4C1Q6ZQN7 724 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.77□□□□□ -0.36
SIX4-201ENST00000216513 SLC37A3Q8NCC5 494 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 OR7G1Q8NGA0 311 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 TMEM239Q8WW34 195 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 LMF1Q96S06 567 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 PAPOLGQ9BWT3 736 aaKnown RBP12.77□□□□□ -0.36
SIX4-201ENST00000216513 TEX101Q9BY14 249 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 OR10A2Q9H208 303 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 MBD1Q9UIS9 605 aaPredicted RBP12.77□□□□□ -0.36
SIX4-201ENST00000216513 KLF11O14901 512 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 KCNJ10P78508 379 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 GXYLT1Q4G148 440 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 PIGCQ92535 297 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 ZNF350Q9GZX5 532 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 ATG5Q9H1Y0 275 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 OLAHQ9NV23 265 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 SLAMF8Q9P0V8 285 aa12.77□□□□□ -0.36
SIX4-201ENST00000216513 BTBD17A6NE02 478 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 ARL6IP5O75915 188 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 CAPNS1P04632 268 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 MS4A2Q01362 244 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 C9orf152Q5JTZ5 239 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 METTL4Q8N3J2 472 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 SDR9C7Q8NEX9 313 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 SFXN5Q8TD22 340 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 C3orf30Q96M34 536 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 FUZQ9BT04 418 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 FBXL4Q9UKA2 621 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 NOP16Q9Y3C1 178 aaKnown RBP12.77□□□□□ -0.37
SIX4-201ENST00000216513 TEX13DA0A0J9YY54 714 aaPredicted RBP12.77□□□□□ -0.37
SIX4-201ENST00000216513 HMGB3O15347 200 aaKnown RBP12.77□□□□□ -0.37
SIX4-201ENST00000216513 FCGR2AP12318 317 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 CDKN2CP42773 168 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 GNB2P62879 340 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 MS4A8Q9BY19 250 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 SLC19A3Q9BZV2 496 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 ENAMQ9NRM1 1142 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 REV1Q9UBZ9 1251 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 ARHGEF15O94989 841 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 F13BP05160 661 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 LIPCP11150 499 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 CLDN6P56747 220 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 ZMYND11Q15326 602 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 SLC6A19Q695T7 634 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 SECISBP2Q96T21 854 aaKnown RBP12.77□□□□□ -0.37
SIX4-201ENST00000216513 QRSL1Q9H0R6 528 aaKnown RBP12.77□□□□□ -0.37
SIX4-201ENST00000216513 CTSFQ9UBX1 484 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 CMAHPQ9Y471 501 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 ATG4BQ9Y4P1 393 aa12.77□□□□□ -0.37
SIX4-201ENST00000216513 HYAL3O43820 417 aaPredicted RBP12.76□□□□□ -0.37
SIX4-201ENST00000216513 SLC16A7O60669 478 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 PHC1P78364 1004 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 GLO1Q04760 184 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 ZNF566Q969W8 418 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 QPCTLQ9NXS2 382 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 LY75O60449 1722 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 SAGE2PA6NJ88 616 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 DVL2O14641 736 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 DBHP09172 617 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 EPHA5P54756 1037 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 AIMP2Q13155 320 aaKnown RBP12.76□□□□□ -0.37
SIX4-201ENST00000216513 LTC4SQ16873 150 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 SLC36A2Q495M3 483 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 MRPL2Q5T653 305 aaKnown RBP12.76□□□□□ -0.37
SIX4-201ENST00000216513 PYHIN1Q6K0P9 492 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 B3GLCTQ6Y288 498 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 BTLAQ7Z6A9 289 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 RAB2BQ8WUD1 216 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 GSTO2Q9H4Y5 243 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 TRAV27A0A087WT01 109 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 TMED7-TICAM2A0A0A6YYA0 188 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 GSTT2BP0CG30 244 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 GNRHRP30968 328 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 EIF1P41567 113 aaKnown RBP12.76□□□□□ -0.37
SIX4-201ENST00000216513 METTL2BQ6P1Q9 378 aaKnown RBP12.76□□□□□ -0.37
SIX4-201ENST00000216513 HACD2Q6Y1H2 254 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 ZNF578Q96N58 590 aaPredicted RBP12.76□□□□□ -0.37
SIX4-201ENST00000216513 FAM118AQ9NWS6 357 aa12.76□□□□□ -0.37
SIX4-201ENST00000216513 TMED7Q9Y3B3 224 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms