RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 RFT1Q96AA3 541 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 HS6ST2Q96MM7 605 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 ZNF681Q96N22 645 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 ULBP3Q9BZM4 244 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 OR10A4Q9H209 315 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 NFKBIL1Q9UBC1 381 aaPredicted RBP13.95□□□□□ -0.18
EFNB1-201ENST00000204961 CES1P1Q9UKY3 287 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 PPIEQ9UNP9 301 aaKnown RBP13.95□□□□□ -0.18
EFNB1-201ENST00000204961 NCKAP1Q9Y2A7 1128 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 FREM2Q5SZK8 3169 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 F13BP05160 661 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 LSSP48449 732 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 FAM109AQ8N4B1 249 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 ABHD4Q8TB40 342 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 RERGQ96A58 199 aaPredicted RBP13.95□□□□□ -0.18
EFNB1-201ENST00000204961 KCNN2Q9H2S1 579 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 PPP1R3EQ9H7J1 279 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 MEPEQ9NQ76 525 aaPredicted RBP13.95□□□□□ -0.18
EFNB1-201ENST00000204961 ACOXLQ9NUZ1 547 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 EIF3KQ9UBQ5 218 aaKnown RBP13.95□□□□□ -0.18
EFNB1-201ENST00000204961 DTX4Q9Y2E6 619 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 TMEM129A0AVI4 362 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 POM121CA8CG34 1229 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 B4DGG1 531 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 I3L521 148 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 CASC3O15234 703 aaKnown RBP13.95□□□□□ -0.18
EFNB1-201ENST00000204961 GNRH1P01148 92 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 EDNRAP25101 427 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 ADH7P40394 386 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 ALG10BQ5I7T1 473 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 SFXN4Q6P4A7 337 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 TOMM5Q8N4H5 51 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 HERVK_113Q902F9 699 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 HSD17B8Q92506 261 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 MED30Q96HR3 178 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 OR2M4Q96R27 311 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 MYADMQ96S97 322 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 GAS2L1Q99501 681 aaPredicted RBP13.95□□□□□ -0.18
EFNB1-201ENST00000204961 TMEM43Q9BTV4 400 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 NDC1Q9BTX1 674 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 TSPAN10Q9H1Z9 355 aaPredicted RBP13.95□□□□□ -0.18
EFNB1-201ENST00000204961 MTHFD2LQ9H903 347 aaPredicted RBP13.95□□□□□ -0.18
EFNB1-201ENST00000204961 RABL2AQ9UBK7 228 aaPredicted RBP13.95□□□□□ -0.18
EFNB1-201ENST00000204961 MED31Q9Y3C7 131 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 AP1M2Q9Y6Q5 423 aa13.95□□□□□ -0.18
EFNB1-201ENST00000204961 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 TRDV1A0A1B0GX56 115 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 IL9P15248 144 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 VASPP50552 380 aaPredicted RBP13.94□□□□□ -0.18
EFNB1-201ENST00000204961 BTG2P78543 158 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 BNC1Q01954 994 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 TMEM196Q5HYL7 178 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 MEPCEQ7L2J0 689 aaKnown RBP13.94□□□□□ -0.18
EFNB1-201ENST00000204961 SIAH3Q8IW03 269 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 OR5M3Q8NGP4 307 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 GIMAP5Q96F15 307 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 TRIM36Q9NQ86 728 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.94□□□□□ -0.18
EFNB1-201ENST00000204961 PLXNA2O75051 1894 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 MN1Q10571 1320 aaPredicted RBP13.94□□□□□ -0.18
EFNB1-201ENST00000204961 FZD7O75084 574 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 RGS9O75916 674 aaPredicted RBP13.94□□□□□ -0.18
EFNB1-201ENST00000204961 PLGP00747 810 aaPredicted RBP13.94□□□□□ -0.18
EFNB1-201ENST00000204961 RPS21P63220 83 aaKnown RBP13.94□□□□□ -0.18
EFNB1-201ENST00000204961 POU6F2P78424 691 aaPredicted RBP13.94□□□□□ -0.18
EFNB1-201ENST00000204961 PRAMEF17Q5VTA0 474 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 CACNG6Q9BXT2 260 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 PBX4Q9BYU1 374 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 NRSN2Q9GZP1 204 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 KCNK15Q9H427 330 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 IL20Q9NYY1 176 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 OR6C2Q9NZP2 312 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 NPAP1Q9NZP6 1156 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 SATB2Q9UPW6 733 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 TRAPPC4Q9Y296 219 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 COLEC10Q9Y6Z7 277 aa13.94□□□□□ -0.18
EFNB1-201ENST00000204961 TRBV2A0A0J9YWF9 115 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 TRAPPC13A5PLN9 417 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 NUDT14O95848 222 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 UCHL1P09936 223 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 UGT2B7P16662 529 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 ZNF81P51508 661 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 ZNF136P52737 540 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 NIPAL3Q6P499 406 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 ZNF765Q7L2R6 523 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 TAF8Q7Z7C8 310 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 FAM160A2Q8N612 972 aaPredicted RBP13.93□□□□□ -0.18
EFNB1-201ENST00000204961 ZNF431Q8TF32 576 aaPredicted RBP13.93□□□□□ -0.18
EFNB1-201ENST00000204961 TEX101Q9BY14 249 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 TMEM27Q9HBJ8 222 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 RPS6KB2Q9UBS0 482 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 NDOR1Q9UHB4 597 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 IKZF2Q9UKS7 526 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 TMEM5Q9Y2B1 443 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 A0A1B0GWA3 101 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 ARRDC5A6NEK1 342 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 EFCAB14O75071 495 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 STX11O75558 287 aa13.93□□□□□ -0.18
EFNB1-201ENST00000204961 HIST1H1CP16403 213 aaKnown RBP13.93□□□□□ -0.18
EFNB1-201ENST00000204961 HTR1FP30939 366 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms