RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 UBL4AP11441 157 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 FBLP22087 321 aaKnown RBP7.6□□□□□ -1.19
VAMP3-201ENST00000054666 OR1D5P58170 312 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 TAS2R43P59537 309 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 GPLD1P80108 840 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 TBC1D25Q3MII6 688 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 SNAP47Q5SQN1 464 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 SYT14Q8NB59 555 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 ASB15Q8WXK1 588 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 CLIP3Q96DZ5 547 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 ART5Q96L15 291 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 SLC46A1Q96NT5 459 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 ERMAPQ96PL5 475 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-201ENST00000054666 CCNL2Q96S94 520 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-201ENST00000054666 OR8D2Q9GZM6 311 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 UBQLN4Q9NRR5 601 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 KLHL21Q9UJP4 597 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 TRAPPC4Q9Y296 219 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 A0A087WUJ7 227 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 ZC3H12DA2A288 527 aaKnown RBP7.59□□□□□ -1.19
VAMP3-201ENST00000054666 CCDC182A6NF36 153 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 ELOA3DA6NLF2 546 aaPredicted RBP7.59□□□□□ -1.19
VAMP3-201ENST00000054666 J3QRE1 110 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 PTP4A3O75365 173 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 RGS9O75916 674 aaPredicted RBP7.59□□□□□ -1.19
VAMP3-201ENST00000054666 LALBAP00709 142 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 MRPL3P09001 348 aaKnown RBP7.59□□□□□ -1.19
VAMP3-201ENST00000054666 MSL3P1P0C860 447 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 GALP22466 123 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 CFL1P23528 166 aaKnown RBP7.59□□□□□ -1.19
VAMP3-201ENST00000054666 RPL4P36578 427 aaKnown RBP7.59□□□□□ -1.19
VAMP3-201ENST00000054666 OR1D4P47884 311 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 LGALS3BPQ08380 585 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 GPR50Q13585 617 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 GALEQ14376 348 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 NDUFAF6Q330K2 333 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 ELOA3BQ3SY89 546 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 ARHGAP40Q5TG30 622 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 FCRLBQ6BAA4 426 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 FAM131AQ6UXB0 335 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 B3GLCTQ6Y288 498 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 MED25Q71SY5 747 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 TMEM151BQ8IW70 566 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 TMEM99Q8N816 258 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 ELOA3Q8NG57 546 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 SETD6Q8TBK2 473 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 PHOSPHO1Q8TCT1 267 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 SLC2A12Q8TD20 617 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 KISS1RQ969F8 398 aaPredicted RBP7.59□□□□□ -1.19
VAMP3-201ENST00000054666 ITPKCQ96DU7 683 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 SENP5Q96HI0 755 aaPredicted RBP7.59□□□□□ -1.19
VAMP3-201ENST00000054666 TNFRSF13CQ96RJ3 184 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 GAL3ST4Q96RP7 486 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 KATNB1Q9BVA0 655 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 HCAR1Q9BXC0 346 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 SLC19A3Q9BZV2 496 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 ENKD1Q9H0I2 346 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 MCCC2Q9HCC0 563 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 LANCL2Q9NS86 450 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 QPCTLQ9NXS2 382 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 ZNF337Q9Y3M9 751 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 TP53BP1Q12888 1972 aaPredicted RBP7.59□□□□□ -1.19
VAMP3-201ENST00000054666 CEP192Q8TEP8 1941 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 A0A1W2PQL4 384 aaPredicted RBP7.59□□□□□ -1.19
VAMP3-201ENST00000054666 SLC35F4A4IF30 521 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 HTR3EA5X5Y0 456 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 FRG2CA6NGY1 282 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 RNF13O43567 381 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 REM1O75628 298 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 IL33O95760 270 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 SBK2P0C263 348 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 CLEC2LP0C7M8 214 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 PNMTP11086 282 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 IL9P15248 144 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 GLB1P16278 677 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 BCKDHBP21953 392 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 AZGP1P25311 298 aaKnown RBP7.59□□□□□ -1.19
VAMP3-201ENST00000054666 PPICP45877 212 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 TGM4P49221 684 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 PPP3R1P63098 170 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 TRAM1Q15629 374 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 ELAVL1Q15717 326 aaKnown RBP7.59□□□□□ -1.19
VAMP3-201ENST00000054666 HLA-DQA1Q5Y7H0 255 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 WBP2NLQ6ICG8 309 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 MZT2AQ6P582 158 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 LINC00114Q6XXX2 140 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 GATSQ8NAP1 163 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 CYB561A3Q8NBI2 242 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 SDR9C7Q8NEX9 313 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 OR52E2Q8NGJ4 325 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 OR4C3Q8NH37 302 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 C1orf216Q8TAB5 229 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 C3orf49Q96BT1 292 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 DIRAS2Q96HU8 199 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 LCORQ96JN0 433 aaPredicted RBP7.59□□□□□ -1.19
VAMP3-201ENST00000054666 TEAD3Q99594 435 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 NEURL2Q9BR09 285 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 ZNF649Q9BS31 505 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 HDHD5Q9BXW7 423 aa7.59□□□□□ -1.19
VAMP3-201ENST00000054666 NDEL1Q9GZM8 345 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms