RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ACOT12Q8WYK0 555 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 ZMYND19Q96E35 227 aaPredicted RBP12.77□□□□□ -0.37
SCARB2-227ENST00000640957 NEURL3Q96EH8 262 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 DNAJA3Q96EY1 480 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 PEX11GQ96HA9 241 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 TIMP4Q99727 224 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 OR2AG1Q9H205 316 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 C6orf106Q9H6K1 298 aaPredicted RBP12.77□□□□□ -0.37
SCARB2-227ENST00000640957 A8MXK9 166 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 PYCARD-AS1I3L0S3 204 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 K7ESM1 405 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 NDUFS6O75380 124 aaKnown RBP12.77□□□□□ -0.37
SCARB2-227ENST00000640957 CSN2P05814 226 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 CLTBP09497 229 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 MTNR1BP49286 362 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 SEC61A1P61619 476 aaKnown RBP12.77□□□□□ -0.37
SCARB2-227ENST00000640957 LTB4RQ15722 352 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 GUCA2BQ16661 112 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 TMPRSS9Q7Z410 1059 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 ANKRD53Q8N9V6 530 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 PFN4Q8NHR9 129 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 C1orf216Q8TAB5 229 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 RFKQ969G6 155 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 ALG14Q96F25 216 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 CRB3Q9BUF7 120 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 CHST6Q9GZX3 395 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 FN3KQ9H479 309 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 USP36Q9P275 1121 aaKnown RBP12.77□□□□□ -0.37
SCARB2-227ENST00000640957 KIF25Q9UIL4 384 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 D6RAR5 112 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 NPC1O15118 1278 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 HOXB3P14651 431 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-227ENST00000640957 ACADLP28330 430 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 RGS8P57771 180 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-227ENST00000640957 DUSP2Q05923 314 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 GXYLT1Q4G148 440 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 PRRT3Q5FWE3 981 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 C22orf39Q6P5X5 142 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 LINC00469Q8N7U9 141 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 POGLUT1Q8NBL1 392 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 TNFAIP8L1Q8WVP5 186 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 TM4SF18Q96CE8 201 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 TCEAL4Q96EI5 215 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 SEC22AQ96IW7 307 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 KCNK15Q9H427 330 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 TMEM185BQ9H7F4 350 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 C20orf141Q9NUB4 165 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 P2RX2Q9UBL9 471 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 FBXL3Q9UKT7 428 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 ZNF346Q9UL40 294 aaKnown RBP12.76□□□□□ -0.37
SCARB2-227ENST00000640957 ASF1AQ9Y294 204 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 CENPVL1A0A0U1RR11 272 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 LEFTY2O00292 366 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 NRG2O14511 850 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-227ENST00000640957 LEFTY1O75610 366 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 ZNF806P0C7X5 589 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 METAP1P53582 386 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 SMIM11AP58511 58 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 TMEM115Q12893 351 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-227ENST00000640957 EIF2B5Q13144 721 aaKnown RBP12.76□□□□□ -0.37
SCARB2-227ENST00000640957 KLF9Q13886 244 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-227ENST00000640957 ENTPD8Q5MY95 495 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 LIN54Q6MZP7 749 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 TMED4Q7Z7H5 227 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 SLITRK4Q8IW52 837 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 PIGXQ8TBF5 258 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 SMPDL3BQ92485 455 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 BBS4Q96RK4 519 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 IFT27Q9BW83 186 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 NKX6-2Q9C056 277 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-227ENST00000640957 UBQLN3Q9H347 655 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 TRIM36Q9NQ86 728 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 MYEF2Q9P2K5 600 aaKnown RBP12.76□□□□□ -0.37
SCARB2-227ENST00000640957 SLC7A7Q9UM01 511 aa12.76□□□□□ -0.37
SCARB2-227ENST00000640957 ARRDC5A6NEK1 342 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 KDM4EB2RXH2 506 aaPredicted RBP12.75□□□□□ -0.37
SCARB2-227ENST00000640957 DISC1C4P0D8 188 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 AIPO00170 330 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 LATO43561 262 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 RPP14O95059 124 aaKnown RBP12.75□□□□□ -0.37
SCARB2-227ENST00000640957 FBXO45P0C2W1 286 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 MST1P26927 711 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 AKR1C3P42330 323 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 TDGQ13569 410 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 GK2Q14410 553 aaPredicted RBP12.75□□□□□ -0.37
SCARB2-227ENST00000640957 PGGHGQ32M88 737 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 PLEKHS1Q5SXH7 462 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 ZNF660Q6AZW8 331 aaPredicted RBP12.75□□□□□ -0.37
SCARB2-227ENST00000640957 FGD2Q7Z6J4 655 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 ZNF614Q8N883 585 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 OR5AR1Q8NGP9 310 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 C2orf15Q8WU43 125 aaKnown RBP12.75□□□□□ -0.37
SCARB2-227ENST00000640957 TSNAXQ99598 290 aaKnown RBP12.75□□□□□ -0.37
SCARB2-227ENST00000640957 DPYSL5Q9BPU6 564 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 MFFQ9GZY8 342 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 GLIPR2Q9H4G4 154 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 CERS4Q9HA82 394 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 MYNNQ9NPC7 610 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 ASB4Q9Y574 426 aa12.75□□□□□ -0.37
SCARB2-227ENST00000640957 CCSO14618 274 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms