RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 FGF17O60258 216 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 DHFRP00374 187 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 F8A1P23610 371 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 RPL4P36578 427 aaKnown RBP13.52□□□□□ -0.25
SCARB2-221ENST00000640341 RPS21P63220 83 aaKnown RBP13.52□□□□□ -0.25
SCARB2-221ENST00000640341 TNFRSF17Q02223 184 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 SFRP4Q6FHJ7 346 aaPredicted RBP13.52□□□□□ -0.25
SCARB2-221ENST00000640341 LRRC28Q86X40 367 aaPredicted RBP13.52□□□□□ -0.25
SCARB2-221ENST00000640341 ZNF431Q8TF32 576 aaPredicted RBP13.52□□□□□ -0.25
SCARB2-221ENST00000640341 CNOT9Q92600 299 aaKnown RBP13.52□□□□□ -0.25
SCARB2-221ENST00000640341 ERMAPQ96PL5 475 aaPredicted RBP13.52□□□□□ -0.25
SCARB2-221ENST00000640341 GDF15Q99988 308 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 PLA2G2FQ9BZM2 168 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 IL21RQ9HBE5 538 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 A0A1B0GVT2 93 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 SSNA1O43805 119 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 SLC43A1O75387 559 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 CPMP14384 443 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 CLDN12P56749 244 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 SUZ12Q15022 739 aaKnown RBP13.52□□□□□ -0.25
SCARB2-221ENST00000640341 NDUFAF6Q330K2 333 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 FBXO42Q6P3S6 717 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 PRR23CQ6ZRP0 262 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 TMEM52Q8NDY8 209 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 GON7Q9BXV9 100 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 STMN3Q9NZ72 180 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 GNG8Q9UK08 70 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 KIAA1549LQ6ZVL6 1849 aa13.52□□□□□ -0.25
SCARB2-221ENST00000640341 CXCL3P19876 107 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 TMEM44Q2T9K0 475 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 SDE2Q6IQ49 451 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 ELMOD2Q8IZ81 293 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 SIX5Q8N196 739 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 SNX33Q8WV41 574 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 GAL3ST3Q96A11 431 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 C10orf90Q96M02 699 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 COQ7Q99807 217 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 SOSTQ9BQB4 213 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 CHIAQ9BZP6 476 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 SPRTNQ9H040 489 aaPredicted RBP13.51□□□□□ -0.25
SCARB2-221ENST00000640341 SLC25A18Q9H1K4 315 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 TRANK1O15050 2925 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 TEX13CA0A0J9YWL9 993 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 PRSS38A1L453 326 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 ANKRD61A6NGH8 418 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 NOS1APO75052 506 aaPredicted RBP13.51□□□□□ -0.25
SCARB2-221ENST00000640341 APODP05090 189 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 IL9P15248 144 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 RAB3BP20337 219 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 MTNR1BP49286 362 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 GALEQ14376 348 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 BICRALQ6AI39 1079 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 METAP1DQ6UB28 335 aaPredicted RBP13.51□□□□□ -0.25
SCARB2-221ENST00000640341 OR4N2Q8NGD1 307 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 ZNF764Q96H86 408 aaPredicted RBP13.51□□□□□ -0.25
SCARB2-221ENST00000640341 KCNJ15Q99712 375 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 TIMM29Q9BSF4 260 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 CACNG6Q9BXT2 260 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 MEPEQ9NQ76 525 aaPredicted RBP13.51□□□□□ -0.25
SCARB2-221ENST00000640341 CYSLTR2Q9NS75 346 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 LYARQ9NX58 379 aaKnown RBP13.51□□□□□ -0.25
SCARB2-221ENST00000640341 ADAM18Q9Y3Q7 739 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 BHLHE40O14503 412 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 SEC14L5O43304 696 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 RCBTB2O95199 551 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 SBK2P0C263 348 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 FAM157BP0CG42 384 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 EIPR1Q53HC9 387 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 LAMTOR1Q6IAA8 161 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 SIAH3Q8IW03 269 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 OR1E3Q8WZA6 343 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 OR14A2Q96R54 314 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 TIMP4Q99727 224 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 CFHR5Q9BXR6 569 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 TMEM27Q9HBJ8 222 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 ZMIZ1Q9ULJ6 1067 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 DAPP1Q9UN19 280 aa13.51□□□□□ -0.25
SCARB2-221ENST00000640341 ARHGEF17Q96PE2 2063 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-221ENST00000640341 SLC22A31A6NKX4 558 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 CA3P07451 260 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 CT62P0C5K7 136 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 PTHLHP12272 177 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 ZNF3P17036 446 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 C5AR1P21730 350 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 ODF4Q2M2E3 257 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 FAM109BQ6ICB4 259 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-221ENST00000640341 ZNF619Q8N2I2 560 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 BMPERQ8N8U9 685 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 OR2M4Q96R27 311 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 AUNIPQ9H7T9 357 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 MED17Q9NVC6 651 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 TMEM5Q9Y2B1 443 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 WDR87Q6ZQQ6 2873 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 KLF4O43474 513 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 PRICKLE3O43900 615 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-221ENST00000640341 OR10H2O60403 315 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 RPP14O95059 124 aaKnown RBP13.5□□□□□ -0.25
SCARB2-221ENST00000640341 POU3F3P20264 500 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-221ENST00000640341 SLC6A1P30531 599 aa13.5□□□□□ -0.25
SCARB2-221ENST00000640341 EEF1A1P68104 462 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms