RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 ZNF337Q9Y3M9 751 aa17.32■□□□□ 0.36
SCARB2-213ENST00000638680 FTCDNL1E5RQL4 147 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 SEC14L2O76054 403 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 NTSR1P30989 418 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 C18orf63Q68DL7 685 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 OR52E1Q8NGJ3 308 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 OR5D14Q8NGL3 314 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 GIMAP5Q96F15 307 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 MED20Q9H944 212 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 HHATLQ9HCP6 504 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 ACKR4Q9NPB9 350 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 VSX1Q9NZR4 365 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-213ENST00000638680 OR7A5Q15622 319 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 SLC46A3Q7Z3Q1 461 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 OR56B4Q8NH76 319 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 OR5B2Q96R09 309 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 TXNL4BQ9NX01 149 aaKnown RBP17.31■□□□□ 0.36
SCARB2-213ENST00000638680 TACR1P25103 407 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 ETV5P41161 510 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 TRA2BP62995 288 aaKnown RBP17.31■□□□□ 0.36
SCARB2-213ENST00000638680 ADARB1P78563 741 aaKnown RBP17.31■□□□□ 0.36
SCARB2-213ENST00000638680 GAB1Q13480 694 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 VDAC3Q9Y277 283 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 ANKRD28O15084 1053 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 FABP7O15540 132 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 PEX14O75381 377 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 SRYQ05066 204 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 RAB40ALP0C0E4 278 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 SERTAD2Q14140 314 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 SLC14A2Q15849 920 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 B3GLCTQ6Y288 498 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 SLC35F3Q8IY50 421 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 DUSP19Q8WTR2 217 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 MZB1Q8WU39 189 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 RAB40AQ8WXH6 277 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 TRMT2BQ96GJ1 504 aaKnown RBP17.31■□□□□ 0.36
SCARB2-213ENST00000638680 PITHD1Q9GZP4 211 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-213ENST00000638680 INIPQ9NRY2 104 aa17.31■□□□□ 0.36
SCARB2-213ENST00000638680 RGPD8O14715 1765 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-213ENST00000638680 GOLGA4Q13439 2230 aaKnown RBP17.3■□□□□ 0.36
SCARB2-213ENST00000638680 A8MVJ9 347 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 SMLR1H3BR10 107 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 PPP3CBP16298 524 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 TSPAN31Q12999 210 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 TDGQ13569 410 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 KCTD11Q693B1 232 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 GPR139Q6DWJ6 353 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 SVBPQ8N300 66 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 BPIFB2Q8N4F0 458 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 NLGN4YQ8NFZ3 816 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-213ENST00000638680 OR4M1Q8NGD0 313 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 ZNF681Q96N22 645 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 NXF5Q9H1B4 397 aaKnown RBP17.3■□□□□ 0.36
SCARB2-213ENST00000638680 ZNF223Q9UK11 482 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-213ENST00000638680 KLK4Q9Y5K2 254 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 A0A0A6YYC8 382 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-213ENST00000638680 I3L1I5 382 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-213ENST00000638680 NUDT21O43809 227 aaKnown RBP17.3■□□□□ 0.36
SCARB2-213ENST00000638680 CSO75390 466 aaKnown RBP17.3■□□□□ 0.36
SCARB2-213ENST00000638680 OPCMLQ14982 345 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 TMEM244Q5VVB8 128 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 TBPL2Q6SJ96 375 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.3■□□□□ 0.36
SCARB2-213ENST00000638680 DPY19L4Q7Z388 723 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 SULF2Q8IWU5 870 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 OR8J2Q8NGG1 315 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 RTP3Q9BQQ7 232 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 C1GALT1Q9NS00 363 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 KLHL42Q9P2K6 505 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 ZNF281Q9Y2X9 895 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 KDM3BQ7LBC6 1761 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 NPC1O15118 1278 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 P2RX6O15547 441 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 OIP5O43482 229 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 RPL22L1Q6P5R6 122 aaKnown RBP17.3■□□□□ 0.36
SCARB2-213ENST00000638680 ZNF582Q96NG8 517 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-213ENST00000638680 CPEB1Q9BZB8 566 aaKnown RBP17.3■□□□□ 0.36
SCARB2-213ENST00000638680 MED6O75586 246 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 CNMDO75829 334 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 SERPINE2P07093 398 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 NTHL1P78549 312 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 OR13C2Q8NGS9 318 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 HAS2Q92819 552 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 OR5M11Q96RB7 305 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 SLC38A1Q9H2H9 487 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 RBFOX1Q9NWB1 397 aaKnown RBP17.3■□□□□ 0.36
SCARB2-213ENST00000638680 SLC35A3Q9Y2D2 325 aa17.3■□□□□ 0.36
SCARB2-213ENST00000638680 MYH13Q9UKX3 1938 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 FADS1O60427 444 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 SLC16A7O60669 478 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 P04436 131 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 PCSK6P29122 969 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 RRAS2P62070 204 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-213ENST00000638680 NFATC4Q14934 902 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 ABHD5Q8WTS1 349 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 DTD2Q96FN9 168 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 HHLA2Q9UM44 414 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 H3BUI4 141 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 SGCEO43556 437 aa17.29■□□□□ 0.36
SCARB2-213ENST00000638680 HOXB5P09067 269 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms