RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 EIF4EBP2Q13542 120 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 FLOT2Q14254 428 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 KIR3DS1Q14943 382 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 ARL6IP1Q15041 203 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 EIF4HQ15056 248 aaKnown RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 AKIRIN2Q53H80 203 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 LY6G6FQ5SQ64 297 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 VASNQ6EMK4 673 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 FRMPD2BQ6IN97 320 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 DOK6Q6PKX4 331 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 C8orf86Q6ZUL3 223 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 MOB2Q70IA6 237 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 ABHD13Q7L211 337 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 NIPA1Q7RTP0 329 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 SETD3Q86TU7 594 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 PLA2G4DQ86XP0 818 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 PHF13Q86YI8 300 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 TMPRSS6Q8IU80 811 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 NAXDQ8IW45 347 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 FAM126BQ8IXS8 530 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 TMEM132CQ8N3T6 1108 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 TMEM35BQ8NCS4 154 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 OR13C5Q8NGS8 318 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 DYNC2LI1Q8TCX1 351 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 DCAF5Q96JK2 942 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 PCGF1Q9BSM1 259 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 ALX4Q9H161 411 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 MAGIXQ9H6Y5 334 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 EGLN3Q9H6Z9 239 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 SFXN1Q9H9B4 322 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 PLGRKTQ9HBL7 147 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 ABCB9Q9NP78 766 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 INPP5EQ9NRR6 644 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 MAT2BQ9NZL9 334 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 CDC42EP3Q9UKI2 254 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 IKZF2Q9UKS7 526 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 NDRG2Q9UN36 371 aaKnown RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 TMED7Q9Y3B3 224 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 NRCAMQ92823 1304 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 NUP155O75694 1391 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 A0A0U1RQF3 1178 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 C5orf60A6NFR6 353 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 VSTM2BA6NLU5 285 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 LINC00587B1AMM8 73 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 PDHXO00330 501 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 CHUKO15111 745 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 FCN3O75636 299 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 TOX4O94842 621 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 RCBTB2O95199 551 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 PSMG1O95456 288 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 SNAP29O95721 258 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 HPRP00739 348 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 NR3C1P04150 777 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 ZDHHC11BP0C7U3 371 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 BMP4P12644 408 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 TSPAN8P19075 237 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 MATN1P21941 496 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 COMTP21964 271 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 LORP23490 312 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 GDNFP39905 211 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 GRIA3P42263 894 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 MAGEA3P43357 314 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 KIR2DL2P43627 348 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 BPIFB4P59827 614 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 RBX1P62877 108 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 GUCY2DQ02846 1103 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 SELENBP1Q13228 472 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 NPTX1Q15818 432 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 DEFB115Q30KQ5 88 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 PAN3Q58A45 887 aaKnown RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 DDI2Q5TDH0 399 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 OR2G6Q5TZ20 316 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 LYPLAL1Q5VWZ2 237 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 NSUN5P2Q63ZY6 315 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 C5orf46Q6UWT4 87 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 MBOAT1Q6ZNC8 495 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 C19orf35Q6ZS72 473 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 LYG2Q86SG7 212 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 PGAM4Q8N0Y7 254 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 PUSL1Q8N0Z8 303 aaKnown RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 Q8N402 240 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 PLA2G15Q8NCC3 412 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 BLOC1S5Q8TDH9 187 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 CA5BP1Q8WTZ4 195 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 PHF10Q8WUB8 498 aaKnown RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 ASB10Q8WXI3 467 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 BORCS5Q969J3 196 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 ERGIC1Q969X5 290 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 DEFB118Q96PH6 123 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 MBOAT4Q96T53 435 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 COPS4Q9BT78 406 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 NDUFAF3Q9BU61 184 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 ACTRT3Q9BYD9 372 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 ZSCAN16Q9H4T2 348 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 KAT8Q9H7Z6 458 aaKnown RBP4.42□□□□□ -1.7
SDCBP-213ENST00000630925 MIOSQ9NXC5 875 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 GPR83Q9NYM4 423 aa4.42□□□□□ -1.7
SDCBP-213ENST00000630925 C1RLQ9NZP8 487 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms