RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 FRG2Q64ET8 278 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 MDGA2Q7Z553 956 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 SERPINA11Q86U17 422 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 STK32CQ86UX6 486 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 HS3ST5Q8IZT8 346 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 CYP4Z2PQ8N1L4 340 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 TMEM132CQ8N3T6 1108 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF527Q8NB42 609 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 CAMKVQ8NCB2 501 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 OR5K1Q8NHB7 308 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF566Q969W8 418 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 FAM162AQ96A26 154 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 FRG2BQ96QU4 278 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 RMND5AQ9H871 391 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 OBP2BQ9NPH6 170 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 VNN3Q9NY84 501 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 SH2B3Q9UQQ2 575 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 NCOA6Q14686 2063 aaPredicted RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 LOC102723996A0A087X1L8 192 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 E9PLN8 166 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 LCMT2O60294 686 aaKnown RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 PSIP1O75475 530 aaKnown RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 MYO1DO94832 1006 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 SERPINA1P01009 418 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 MALP21145 153 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 GSTM2P28161 218 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 IMPA1P29218 277 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 TRPC1P48995 793 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 IL18R1Q13478 541 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 EXT1Q16394 746 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 ZIK1Q3SY52 487 aaPredicted RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF691Q5VV52 312 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 LIPJQ5W064 366 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF425Q6IV72 752 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 GALNT18Q6P9A2 607 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 SHQ1Q6PI26 577 aaKnown RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 ASPGQ86U10 573 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 C8orf59Q8N0T1 100 aaPredicted RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 EID3Q8N140 333 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 CLEC4FQ8N1N0 589 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF740Q8NDX6 193 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 RND1Q92730 232 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 TANKQ92844 425 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 GFM2Q969S9 779 aaKnown RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 PYURFQ96I23 114 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 METTL2AQ96IZ6 378 aaKnown RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 TSSK3Q96PN8 268 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 VKORC1Q9BQB6 163 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 TBCDQ9BTW9 1192 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 NAA50Q9GZZ1 169 aaKnown RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 RNF32Q9H0A6 362 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 LIME1Q9H400 295 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 ELOVL6Q9H5J4 265 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 RNF6Q9Y252 685 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 PLEKHA6Q9Y2H5 1048 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 TRBV11-1A0A0K0K1C0 115 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 CLCA1A8K7I4 914 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 CLGNO14967 610 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 CHST10O43529 356 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 IFNA16P05015 189 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 IL7RP16871 459 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 GPX2P18283 190 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 PRPS1L1P21108 318 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 TMBIM6P55061 237 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 SLC26A5P58743 744 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 ISL1P61371 349 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 RPS15AP62244 130 aaKnown RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 CD47Q08722 323 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 C6orf141Q5SZD1 244 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 NOXRED1Q6NXP6 359 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 IL20RBQ6UXL0 311 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 R3HCC1LQ7Z5L2 792 aaKnown RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 CAMKMTQ7Z624 323 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 PTOV1Q86YD1 416 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 SPARTQ8N0X7 666 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 MDS2Q8NDY4 140 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 NUP43Q8NFH3 380 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 OR8J2Q8NGG1 315 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 OR52N2Q8NGI0 321 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 OR5AN1Q8NGI8 311 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 B4GALNT2Q8NHY0 566 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 FAM120BQ96EK7 910 aaKnown RBP4.43□□□□□ -1.7
LINC00550-201ENST00000629293 EGLN2Q96KS0 407 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 OR10A5Q9H207 317 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 KCMF1Q9P0J7 381 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 ACAD8Q9UKU7 415 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 SLC22A14Q9Y267 594 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 ABCA1O95477 2261 aa4.43□□□□□ -1.7
LINC00550-201ENST00000629293 A0A1W2PPW3 197 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 H0YIG0 161 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 H0YIV9 168 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 LY86O95711 162 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 C1QCP02747 245 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 FHP07954 510 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 HIST1H2AGP0C0S8 130 aaPredicted RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF888P0CJ79 500 aaPredicted RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 HIST1H2ADP20671 130 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 MATN1P21941 496 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 PPP2R1BP30154 601 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 RYKP34925 604 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms