RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 POLR2HP52434 150 aaKnown RBP8.38□□□□□ -1.07
HDAC9-229ENST00000622668 MCCD1P59942 119 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-229ENST00000622668 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-229ENST00000622668 DDI2Q5TDH0 399 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 TMEM53Q6P2H8 277 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 QSOX2Q6ZRP7 698 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 APLFQ8IW19 511 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-229ENST00000622668 OR10G3Q8NGC4 313 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 OR51G2Q8NGK0 314 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 OR2T4Q8NH00 348 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 FBXO27Q8NI29 283 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF845Q96IR2 970 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-229ENST00000622668 CLMPQ9H6B4 373 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 GALNT9Q9HCQ5 603 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 INIPQ9NRY2 104 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 FOXJ2Q9P0K8 574 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 SLC7A8Q9UHI5 535 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 OAZ3Q9UMX2 235 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 COMMD3-BMI1R4GMX3 469 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 MYO7BQ6PIF6 2116 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 HMX2A2RU54 273 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 ENO4A6NNW6 628 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 ICOSLGO75144 302 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 RHCEP18577 417 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 RANBP1P43487 201 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 DAP3P51398 398 aaKnown RBP8.38□□□□□ -1.07
HDAC9-229ENST00000622668 GBX2P52951 348 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-229ENST00000622668 NUDT6P53370 316 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 FIP1L1Q6UN15 594 aaKnown RBP8.38□□□□□ -1.07
HDAC9-229ENST00000622668 METTL25Q8N6Q8 603 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 NT5CQ8TCD5 201 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 FOXN4Q96NZ1 517 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 SMURF2Q9HAU4 748 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 SLC24A3Q9HC58 644 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF223Q9UK11 482 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-229ENST00000622668 SPTBN4Q9H254 2564 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 EFCAB10A6NFE3 127 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF587BE7ETH6 402 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 J3QLW9 94 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 APOL3O95236 402 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 STSP08842 583 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF19P17023 458 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 TNFSF4P23510 183 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 EMP3P54852 163 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 SH3BGRP55822 239 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-229ENST00000622668 TMEM44Q2T9K0 475 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 SLC22A25Q6T423 547 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF813Q6ZN06 617 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 SLCO6A1Q86UG4 719 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 PNLDC1Q8NA58 520 aaKnown RBP8.38□□□□□ -1.07
HDAC9-229ENST00000622668 CNRIP1Q96F85 164 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-229ENST00000622668 PHOX2BQ99453 314 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 TRIM4Q9C037 500 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 RNPEPL1Q9HAU8 725 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 ZFP64Q9NPA5 681 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 KCNJ16Q9NPI9 418 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 DUSP22Q9NRW4 184 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 TMEM181Q9P2C4 612 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 ARHGEF17Q96PE2 2063 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-229ENST00000622668 FAAHO00519 579 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 CASC3O15234 703 aaKnown RBP8.37□□□□□ -1.07
HDAC9-229ENST00000622668 MPZL2O60487 215 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 MNDAP41218 407 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 ERVK-25P63136 954 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 OR1Q1Q15612 314 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 IQCCQ4KMZ1 466 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 C3orf33Q6P1S2 294 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 C16orf87Q6PH81 154 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 SHQ1Q6PI26 577 aaKnown RBP8.37□□□□□ -1.07
HDAC9-229ENST00000622668 XKR5Q6UX68 686 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 MRPL21Q7Z2W9 205 aaKnown RBP8.37□□□□□ -1.07
HDAC9-229ENST00000622668 PIGWQ7Z7B1 504 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF101Q8IZC7 436 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 SLC38A5Q8WUX1 472 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 CNOT9Q92600 299 aaKnown RBP8.37□□□□□ -1.07
HDAC9-229ENST00000622668 GPR78Q96P69 363 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 PHF12Q96QT6 1004 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 PRDM7Q9NQW5 492 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 GNG8Q9UK08 70 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 ENPP4Q9Y6X5 453 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-229ENST00000622668 CLPTM1O96005 669 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 IGHG1P01857 330 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 EVI2BP34910 448 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 PIGFQ07326 219 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 TRAP1Q12931 704 aaKnown RBP8.37□□□□□ -1.07
HDAC9-229ENST00000622668 LY6DQ14210 128 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 ZIC1Q15915 447 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 NDUFAF6Q330K2 333 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF425Q6IV72 752 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 LRRC18Q8N456 261 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 ANKK1Q8NFD2 765 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 OR8J2Q8NGG1 315 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 ADAMTS14Q8WXS8 1223 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF317Q96PQ6 595 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-229ENST00000622668 TCF7L1Q9HCS4 588 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 S100A14Q9HCY8 104 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 NINQ8N4C6 2090 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 A1L4Q6 167 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 APOA1P02647 267 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms