RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 KCNAB2Q13303 367 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 MED21Q13503 144 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 TOMM34Q15785 309 aaPredicted RBP16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 STK32CQ86UX6 486 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 PLCZ1Q86YW0 608 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 HIPK1Q86Z02 1210 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 MARVELD2Q8N4S9 558 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 WDSUB1Q8N9V3 476 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 MDS2Q8NDY4 140 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 OR2M3Q8NG83 312 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 NTNG2Q96CW9 530 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 TMEM41AQ96HV5 264 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 BARD1Q99728 777 aaKnown RBP16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 C9orf16Q9BUW7 83 aa16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 ANKRD11Q6UB99 2663 aaPredicted RBP16.22■□□□□ 0.19
PTCHD3-202ENST00000622555 TAF4O00268 1085 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 LYNP07948 512 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 LIMS1P48059 325 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 HSPA13P48723 471 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 GK3PQ14409 553 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 QPRTQ15274 297 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 ALG10BQ5I7T1 473 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 DCST1Q5T197 706 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 OTUD3Q5T2D3 398 aaPredicted RBP16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 TMEM154Q6P9G4 183 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 BORAQ6PGQ7 559 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 ULK3Q6PHR2 472 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 IGFL2Q6UWQ7 119 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 ZBTB49Q6ZSB9 765 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 FADS6Q8N9I5 356 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 OR1J4Q8NGS1 313 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 DNAJA4Q8WW22 397 aaPredicted RBP16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 ZNF524Q96C55 264 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 NRBF2Q96F24 287 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 C5orf34Q96MH7 638 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 SMAD5Q99717 465 aaKnown RBP16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 HES7Q9BYE0 225 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 ANKRD19PQ9H560 264 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 KLHL1Q9NR64 748 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 DEPPQ9NTK1 212 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 TAS2R10Q9NYW0 307 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 PDP1Q9P0J1 537 aaPredicted RBP16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 FBXL2Q9UKC9 423 aa16.21■□□□□ 0.19
PTCHD3-202ENST00000622555 CHD8Q9HCK8 2581 aa16.21■□□□□ 0.18
PTCHD3-202ENST00000622555 A0A087WV48 116 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 CHP2O43745 196 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 TRIM3O75382 744 aaPredicted RBP16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 CCNB2O95067 398 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 LYPD3O95274 346 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 GP1BBP13224 206 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 CD46P15529 392 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 PRKACGP22612 351 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 SLC1A3P43003 542 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 ZNF41P51814 821 aaPredicted RBP16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 TIGD3Q6B0B8 471 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 PODNL1Q6PEZ8 512 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 TBPL2Q6SJ96 375 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 NKAIN4Q8IVV8 208 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 CBR4Q8N4T8 237 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 SLC7A13Q8TCU3 470 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 GIPC3Q8TF64 312 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 SLC38A4Q969I6 547 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 C3orf49Q96BT1 292 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 ZNF597Q96LX8 424 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 PTGES2Q9H7Z7 377 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 COQ10BQ9H8M1 238 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 MPDZO75970 2070 aa16.2■□□□□ 0.18
PTCHD3-202ENST00000622555 SOCS2O14508 198 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 NTN1O95631 604 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 SP1P08047 785 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 MST1P26927 711 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 CXADRP78310 365 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 SEC23BQ15437 767 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 MICAQ29983 383 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 SLC25A25Q6KCM7 469 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 ARSKQ6UWY0 536 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 TMEM255BQ8WV15 326 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 TMEM234Q8WY98 164 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 GNRHR2Q96P88 292 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 FAM173AQ9BQD7 235 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 FUZQ9BT04 418 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 TUBA8Q9NY65 449 aaPredicted RBP16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 VDAC3Q9Y277 283 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 KLF13Q9Y2Y9 288 aaPredicted RBP16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 PCDHGA9Q9Y5G4 932 aaKnown RBP16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 DMXL2Q8TDJ6 3036 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 SH3PXD2BA1X283 911 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 FAM47E-STBD1D6RA91 191 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 NME2P1O60361 137 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 PTNP21246 168 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 NME2P22392 152 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 TNFSF10P50591 281 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 PPP4R4Q6NUP7 873 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 UGT2A3Q6UWM9 527 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 ZNF730Q6ZMV8 503 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 WDR88Q6ZMY6 472 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 SULF2Q8IWU5 870 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 GALNT4Q8N4A0 578 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 OR2M7Q8NG81 312 aa16.19■□□□□ 0.18
PTCHD3-202ENST00000622555 OR10G2Q8NGC3 310 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms